भा.कृ.अ.प. - भारतीय कृषि अनुसंधान संस्थान | ICAR-Indian Agricultural Research Institute

Agricultural Knowledge Management Unit (AKMU)      (3 scientists)

Dr Ratna Prabha

   

Field of Specialisation : Bioinformatics

Dr Ratna Prabha
Scientist

M.Sc. : Banasthali Vidyapith, Rajasthan

Ph.D : Mewar University, Rajasthan

Google Scholar

PG School, Faculty Disciplines : Bioinformatics



Top 10 Publications having NAAS rating 6 and above with first or corresponding author only

  1. Singh DP, Bisen MS, Prabha R, Maurya S, Yerasu SR, Shukla R, Tiwari JK, Chaturvedi KK, Farooqi MS, Srivastava S, Rai A, Sarma BK, Rai N, Singh PM, Behera TK, Farag MA. Untargeted Metabolomics of Alternaria solani-Challenged Wild Tomato Species Solanum cheesmaniae Revealed Key Metabolite Biomarkers and Insight into Altered Metabolic Pathways. Metabolites. 2023; 13(5):585. https://doi.org/10.3390/metabo13050585
  2. Prabha R, Singh DP, Sinha S, Ahmad K, Rai A. 2016. Genome-wide comparative analysis of codon usage bias and codon context patterns among cyanobacterial genomes. Marine Genomics (Elsevier). 32:31-39.
  3. Prabha R, Singh DP, Gupta SK, Rai A. 2014. Whole genome phylogeny of Prochlorococcus marinus group of cyanobacteria: genome alignment and overlapping gene approach. Interdisciplinary Sciences: Computational Life Sciences (Springer), 6:1–9.
  4. Singh DP, Singh V, Shukla R, Sahu P, Prabha R, Gupta A, Sarma BK, Gupta VK. Stage-dependent concomitant microbial fortification improves soil nutrient status, plant growth, antioxidative defense system and gene expression in rice. Microbiological Research. 2020. Volume 239, 126538
  5. Singh DP, Singh V, Gupta VK, Shukla R, Prabha R, Sarma BK, Patel JS. Microbial inoculation in rice regulates antioxidative reactions and defense related genes to mitigate drought stress. Scientific Reports 2020, 10(1):1-17.
  6. Prabha R, Singh DP, Gupta S, Gupta VK, El-Enshasy HA, Verma MK. Rhizosphere metagenomics of Paspalum scrobiculatum L. (Kodo millet) reveals rhizobiome multifunctionalities. Microorganisms 2019, 7:608.
  7. Prabha R, Singh DP (2019) Cyanobacterial phylogenetic analysis based on phylogenomics approaches render evolutionary diversification and adaptation: an overview of representative orders. 3 Biotech, 9(3), 87.
  8. Singh DP#, Prabha R#, Gupta VK, Verma MK (#Joint First Authors). 2018. Metatranscriptome analysis deciphers multifunctional genes and enzymes linked with the degradation of aromatic compounds and pesticides in the wheat rhizosphere. Frontiers in Microbiology, 9:1331.
  9. Prabha R, Singh DP, Ahmad K, Kumar SPJ, Kumar P. 2019. Subtractive genomics approach for identification of putative antimicrobial targets in Xanthomonas oryzae pv. oryzae KACC10331. Archives of Phytopathology and Plant Protection, 53 (7-8): 863-872.
  10. Prabha R, Singh DP, Rai A (2015) StressMicrobesInfo: Database of Microorganisms Responsive to Stress Conditions. Interdiscip Sci. (Springer) 8(3):203-8

Patent / Technologies / Methodologies / System etc. (Upto Five) :

  1. XenMetaDB. Interactive user-friendly web-database of genes/transcripts and pathways involved in degradation of pesticides and other xenobiotics, mined from 105 crop rhizosphere metagenome datasets. http://webapp.cabgrid.res.in/xenmetadb
  1. FungRep. Interactive user-friendly web-database of microsatellite repeats from different fungal species. http://www.mcr.org.in/fungrep/
  1. ChloroMitoSSRDB. Contains information of microsatellites in chlorplast and mitochondrial genomes. http://www.mcr.org.in/chloromitossrdb/index.php
  1. StressMicrobesInfo. Contains information about microorganisms which are involved in various stress conditions. http://webapp.cabgrid.res.in/Stressmicrobs/stressdb.html
  1. BioInfoKnowledgeBase. Contains information about more than 1000 tools and databases which are required for various kinds of analyses and knowledge search. http://webapp.cabgrid.res.in/BIKB/edb_home.html

Awards / Recognitions / Fellowship (Upto Five) :

  1. NAAS Young Scientist Award.
  1. SERB National Post Doctoral Fellowship (N-PDF) by SERB, DST, Govt of India.
  1. International travel grant by Science and Engineering Research Board (SERB), Department of Science and Technology, Govt. of INDIA for participating in 9th Asian Young Researchers Conference on Computational and Omics Biology, 21-22 Jan. 2016, Bipolis (Singapore).
  1. International travel grant from “Genome Big Bang” group (Global COE program), University of Tokyo for oral presentation in 5th AYRCOB, Korea, 2011.
  1. Young Scientist Award by Chhattisgarh Council of Science and Technology, Chhattisgarh.