भा.कृ.अ.प. - भारतीय कृषि अनुसंधान संस्थान | ICAR-Indian Agricultural Research Institute

Genetics Research Publications

Satvir Kaur Grewal, Kanu Priya Sharma, Rachana D Bharadwaj, Venkatraman Hegde, Shailesh Tripathi, Sarvjeet Singh, Pradeep Kumar Jain, Pawan Kumar Agrawal, Biswajit Mondal (2020): Understanding genotypic variation and identification of promising genotypes for iron and zinc content in chickpea (Cicer arietinum L.). Journal of Food Composition and Analysis 88:103458
Y. S. Harshavardhana, Venkatraman Hegde, Shailesh Tripathi, R. S. Raje, P. K. Jain, Kishor Gaikwad, C. Bharadwaj, Rajendra Kumar, Rajesh Kumar Singh, Mukesh Kumar Sharma and S. K. Chauhan (2019): Genetics of semi-determinacy and identification of molecular marker linked to Dt1 locus in chickpea (Cicer arietinum L.). Indian J. Genet., 79(1) Suppl. 270-275
Akash Sharma, Udita Basu, Naveen Malik, Anurag Daware, Virevol Thakro, Laxmi Narnoliya, Deepak Bajaj, Shailesh Tripathi, VS Hegde, Hari D Upadhyaya, Akhilesh K Tyagi, Swarup K Parida (2019): Genome-wide cis-regulatory signatures for modulation of agronomic traits as exemplified by drought yield index (DYI) in chickpea. Functional & Integrative Genomics 19:973-992
Yadav SS, VS Hegde, AB Habibi and M Dia and Suman Verma (2019): Climate Change, Agriculture and Food Security. In: Food Security and Climate Change, 1-24, First Edition, John Wiley & Sons Ltd.
Hegde VS, PK Agarwal, S Tripathi and GP Dixit 2016: Genetic diversity and new plant ideotypes of chickpea (Cicer arietinum) for higher productivity and nutritional security. Indian Journal of Agronomy 61 (4th IAC Special issue): S59-S70.
Hegde VS, Tripathi S, Bharadwaj C, Agrawal PK and Chaudhary AK (2018): Genetics and genomics approaches to improve adaptation and yield of chickpea in semi-arid environments. SABRAO Journal of Genetics & Breeding 50(2):217-241:
Hegde VS (2011): Morphology and genetics of a new found determinate genotype in chickpea. Euphytica 182:35-42
Hegde VS (2010): Genetics of flowering time in chickpea in a semi-arid environment. Plant Breeding 129:683-687
Hegde VS & SK Mishra (2009): Landraces of cowpea, Vigna unguiculata (L.) Walp., as potential sources of genes for unique characters in breeding. Genetic Resources and Crop Evolution. 56:615-627
Hegde, V. S., S. S. Yadav and J. Kumar (2007): Heterosis and combining ability for biomass and harvest index in chickpea under drought prone short duration environment. Euphytica:157:223-230.
Katyal,M., N. Singh, ....., Anju Mahendru-Singh and Ritika Bajaj. 2020. Comparative analysis of native and defatted flour from hard, extraordinarily soft, and medium‐hard wheat varieties for protein solvation, pasting, mixing, and dough rheological behaviour. Journal of Food Science, 85:65-76
Rai,A., Anju Mahendru-Singh, et al. 2019. Marker-assisted transfer of PinaD1a gene to develop soft grain wheat cultivars. 3Biotech, 9: 183-187
Rai,A., Anju Mahendru-Singh, et al. 2019. Rheological evaluations and molecular marker analysis of cultivated bread wheat varieties of India. J Food Sci & Technol.56:1696-1707
Katyal, M, A S Virdi, N Singh +2 and Anju Mahendru-Singh. 2018.Fractionation and grain hardness effect on protein profiling, pasting and rheological properties of flours from medium-hard and extraordinarily soft wheat varieties.J Food Sci. Technol.55(11):4661-4674.
Krishnappa G, Mahendru-Singh A, et al. 2017. Molecular mapping of the grain iron and zinc concentration, protein content and thousand kernel weight in wheat (Triticum aestivum L.). PLOSOne. 12(4):1-17
Katyal, M., N Singh, A S Virdi, +2 and Anju M Singh. 2017. Extraordinarily soft, medium-hard and hard Indian wheat varieties: Composition, protein profile, dough and baking properties.Food Research International. 100:306-17
Kaur, A, K Shevkani, M Katyal, +2 and Anju M Singh. 2016.Physico chemical and rheological properties of starch and flour from different durum wheat varieties and their relationship with noodle quality. J Food Sci & Technol. 53(4):21272138
Katyal, M., Virdi, A, +3 and Singh, A.M. 2016. Diversity in quality traits amongst Indian Wheat Varieties I: Flour and Protein characteristics. Food Chemistry. 194:337-344.
Katyal, M., Virdi, A, +3 and Singh, A.M. 2016. Diversity in quality traits amongst Indian Wheat Varieties I: Paste, dough and muffin making properties. Food Chemistry. 197:316-324.
Kaur, A., Singh, N., Kaur, S. +3 and Singh, A.M. 2015. Food Chemistry. 188: 517-526.
Bollinedi H, Singh AK, Singh N, Gopala Krishnan S, Bhowmick PK, Vinod KK, Nagarajan M and Ellur RK. 2020. Genetic and genomic approaches to address rapid rancidity of rice bran. Critical Reviews in Food Science and Nutrition, 110. doi:10.1080/10408398.2020.1718598.
Bollinedi H, Lad JD, Gopala Krishnan S, Bhowmick PK, Prabhu KV, Singh NK and Singh AK. 2019. Kinetics of β-carotene degradation under different storage conditions in transgenic Golden Rice lines. Food Chemistry 278: 773779.
Singh AK, Singh VK, Singh A, Ellur RK, Pandian RTP, Gopala Krishnan S, Singh UD, Nagarajan M, Vinod KK and Prabhu KV. (2014) Introgression of multiple disease resistance into a maintainer of Basmati rice CMS line by marker assisted backcross breeding. Euphytica, 203: 97-107
Marathi B., Guleria S, Mohapatra T, Parsad R, Nagarajan M, Vinod KK, Atwal SS, Prabhu KV, Singh NK and Singh AK (2012) QTL analysis of novel genomic regions associated with yield and yield related traits in new plant type based recombinant inbred lines of rice (Oryza sativa L.). BMC Plant Biology. 12: 137
Ellur RK, Khanna A, Yadav A, Pathania, S, Rajashekara H, Singh VK, Gopala Krishnan S, Bhowmick PK, Nagarajan M, Vinod KK, Prakash G, Mondal KK, Singh NK and Singh AK (2016) Improvement of Basmati rice varieties for resistance to blast and bacterial blight diseases using marker assisted backcross breeding. Plant Sci. 242: 330-341
Singh VK, Singh A, Singh SP, Ellur RK, Choudhary V, Sarkel S, Singh D, Gopala Krishnan S, Nagarajan M, Vinod KK, Singh UD, Rathore R, Prashanthi SK, Aggrawal PK, Bhatt JC, Mohapatra T, Prabhu KV and Singh AK (2011) Incorporation of blast resistance into PRR78, an elite Basmati rice restorer line, through marker assisted backcross breeding. Field Crop Research.,128 : 8-16
Fiyaz RA, Yadav AK, Gopala Krishnan S, Ellur RK, Bashyal BM, Grover N, Bhowmick PK, Nagarajan M, Vinod KK, Singh NK, Prabhu KV and Singh AK. 2016. Mapping quantitative trait loci responsible for resistance to Bakanae disease in rice. Rice 9(1):45
Babu NN, Gopala Krishnan S, Vinod KK, Krishnamurthy SL, Singh VK, Singh MP, Singh R, Ellur RK, Rai V, Bollinedi H, Bhowmick PK, Yadav A, Mariappan N, Singh NK, Prabhu K and Singh AK. 2017. Marker aided incorporation of Saltol, a major QTL associated with seedling stage salt tolerance, into Oryza sativa Pusa Basmati 1121. Frontiers in Plant Sciences 8: 41. doi: 10.3389/fpls.2017.00041.
Ellur RK, Khanna A, Gopala Krishnan S, Bhowmick PK, Vinod KK, Nagarajan M, Mondal KK, Singh NK, Singh K, Prabhu KV and Singh AK. 2016. Marker-aided incorporation of Xa38, a novel bacterial blight resistance gene, in PB 1121 and comparison of its resistance spectrum with xa13+Xa21. Scientific Reports 6: 29188.
Khanna A, Sharma V, Ellur RK, Shikari AB, Gopala Krishnan S, Singh UD, Prakash G, Sharma TR, Rathour R, Variar M, Prashanthi SK, Nagarajan M, Vinod KK, Bhowmick PK, Singh NK, Prabhu KV, Singh BD and Singh AK. 2015. Development and evaluation of near isogenic lines for major blast resistance gene(s) in Basmati rice. Theoretical and Applied Genetics 128(7): 1243-1259. DOI: 10.1007/s00122-015-2502-4.
A new source of cytoplasmic male sterility in pearl millet: RFLP analysis of mitochondrial DNA. KS V Sujata, S Sivaramakrishnan, K N Rai Genome 07/1994; 37(3):482-6. DOI:10.1139/g94-067 � 37 (3), 482-6
Development and validation of functional CAPS markers for the FAE genes in Brassica juncea and their use in marker assisted selection SVDKY Navinder Saini, Naveen Singh, Anil Kumar, Nitika Vihan, Sangita Yadav Breeding Science 66 (5), 831-837
Promoter polymorphism in FAE1.1 and FAE1.2 genes associated with erucic acid content in Brassica juncea N Saini, MK Koramutla, N Singh, S Singh, R Singh, S Yadav, ... Molecular Breeding 39 (5), 75
Transfer and expression of Bradyrhizobium japonicum uptake hydrogenase genes in Cicer-rhizobia S Vasudev, ML Lodha, KR Sreekumar Indian journal of experimental biology 28 (11), 1040-1045
Genetic variability and trait association studies in Indian mustard (Brassica juncea) DK Yadava, SC Giri, M Vignesh, S Vasudev, A Kumar Yadav, B Dass, ... Indian Journal of Agricultural Sciences 81 (8), 712
Assessment of genetic diversity in Brassica juncea Brassicaceae genotypes using phenotypic differences and SSR markers N Singh, S Vasudev, D Kumar Yadava, S Kumar, S Naresh, ... Revista de biologa tropical 61 (4), 1919-1934
Cross-transferability and Polymorphic Potential of Genomic STMS Markers of Brassica Species SVTM D K Yadava, Swarup K Parida, V K Dwivedi, A Varshney, Irfan A Ghazi J. Plant Biochemistry & Biotechnology 18 (1), 29-36
Combining ability and heterobeltiosis for yield and yield-contributing traits in Indian mustard (Brassica juncea) DK Yadava, N Singh, S Vasudev, R Singh, S Singh, SC Giri, VK Dwivedi, ... Indian J. Agri. Sci 82 (7), 563-567
Transfer and expression of Bradyrhizobium japonicum uptake hydrogenase genes in Cicer-rhizobia S Vasudev, ML Lodha, KR Sreekumar Indian journal of experimental biology 28 (11), 1040-1045
Validation of molecular markers linked to low glucosinolate QTLs for marker assisted selection in Indian mustard (Brassica juncea L. Czern & Coss) HD Pushpa, DK Yadava, N Singh, S Vasudev, N Saini, V Muthusamy, ... Indian Journal of Genetics 76 (1), 64-68
K. Rani, B.R. Raghu, S.K. Jha, Priyanka Agarwal, Niharika Mallick, M. Niranjana, J.B. Sharma, A.K.Singh, N.K. Sharma, S. Rajkumar, S.M.S. Tomar and Vinod* (2020). A novel leaf rust resistance gene introgressed from Aegilops markgrafii maps on chromosome arm 2AS of wheat. Theoretical and Applied Genetics, 133:2685–2694 :doi 10.1007/s00122-020-03625-w
Vishal Dinkar, S.K. Jha, Niharika Mallick, M. Niranjana, Priyanka Agarwal, J.B. Sharma and Vinod* (2020). Molecular mapping of a new recessive wheat leaf rust resistance gene originating from Triticum spelta. Scientific Reports, DOI : 10.1038/s41598-020-78679-3
Aakriti Verma, M. Niranjana, S. K. Jha, Niharika Mallick, Priyanka Agarwal and Vinod* (2020). QTL detection and putative candidate gene prediction for leaf rolling under moisture stress condition in wheat. Scientific Reports, 10:18696 doi.org/10.1038/s41598-020-75703-4
Niharika Mallick,*, Shailendra K. Jha, Priyanka Agarwal, Anchal Mall, Niranjana M., Sachin Kumar , Manish K. Choudhary , Shreshtha Bansal, M. S. Saharan, J. B. Sharma and Vinod*(2022). Marker-assisted improvement of bread wheat variety HD2967 for leaf and stripe rust resistance. Plants ,11:1152. https://doi.org/ 10.3390/plants11091152
Niranjana M., Vinod*, J.B.Sharma, Niharika Mallick, S.M.S.Tomar and S.K. Jha (2017). Cytogenetic analysis and mapping of leaf rust resistance in Aegilops speltoides derived bread wheat line Selection 2427 carrying putative gametocidal gene(s): Genome, 60 (12) : 1076-1085 , https://doi.org/10.1139/gen-2017-0107
Nataraj V., Vinod*, J.B Sharma, Jeky Chanwala, Niharika Mallick and S.K.Jha (2017). Molecular characterization of Triticum militinae derived introgression lines carrying leaf rust resistance. Genet Res Crop Evolution : DOI: 10.1007/s10722-017-0572-7
Naik K.Bhojaraja Vinod*, J.B.Sharma, M. Sivasamy, K.V. Prabhu, R.S.Tomar and S.M.S. Tomar (2015). Molecular mapping and validation of the microsatellite markers linked to the Secale cereale derived leaf rust resistance gene Lr45 in wheat. Molecular Breeding, doi: 10.1007/s11032-015-0234-4
Gireesh C., Vinod*, J.B.Sharma and K.V.Prabhu (2015). Genetics and molecular mapping of stem rust resistance in bread wheat line WR95. Euphytica, 205: 869-875, DOI: 10.1007/s10681-015-1428-x
Mallick Niharika, Vinod*, J.B.Sharma, R.S.Tomar, M. Sivasamy and K. V. Prabhu (2015). Marker-assisted backcross breeding to combine multiple rust resistance in wheat. Plant Breeding, 134:172-177. doi:10.1111/pbr.12242
Tomar R.S., Rupesh K. Deshmukh, Bhojaraja Naik K., S.M.S.Tomar and Vinod* (2014) Development of chloroplast specific microsatellite markers for molecular characterization of alloplasmic lines and phylogenetic analysis in wheat. Plant Breeding, 133: 12-18
Dikshit*, H.K., Jhang, T., Singh, N.K., Koundal, K.R., Bansal, K.C., Chandra, N., Tickoo, J.L., Sharma, T.R. (2007) Genetic differentiation of Vigna species by RAPD, URP and SSR markers.-Biol. Plant. 51: 451457
Dikshit*, H. K., Singh, A., Singh, D., Aski, M. S., Prakash, P., Jain, N., et al. (2015). Genetic diversity in Lens species revealed by EST and genomic simple sequence repeat analysis. PLoS ONE 10:0138101. doi: 10.1371/journal.pone.0138101
Singh A, Dikshit* HK, Jain N, et al. (2014) Efficiency of SSR, ISSR, and RAPD Markers in molecular characterization of mungbean and other Vigna species. Indian J Biotechnol.13:8188.
A. Singh, H.K. Dikshit*, D. Singh, N. Jain, M. Aski, A. Sarker, T.R. Sharma (2016) Use of expressed sequence tag microsatellite markers for exploring genetic diversity in lentil and related wild species J. Agric. Sci., 154:1254-1269
Tewari K, Dikshit* HK, Jain N, Kumari J, Singh D. (2012)Genetic differentiation of wild and cultivated Lens based on molecular markers. J. Plant Biochem. Biotechnol.; 10.1007/s13562-011-0087-9
Jain N, Dikshit* HK, Singh D, Singh A, Kumar H. (2013) Discovery of EST-Derived Microsatellite Primers in the Legume Lens culinaris (Fabaceae) Appl Pl Sci. 1(7):1200539 2013 10.3732/apps.1200539
Dikshit*, H.K.; Sharma, T.R.; Singh, B.B.; Kumari, J.(2009) Molecular and morphological characterization of fixed lines from diverse cross in mung bean (Vigna radiata (L.) Wilczek). J. Genet. 88, 341344.
Dikshit* HK, Singh A, Singh D, Aski M, Jain N, Hegde VS, Basandrai AK, Basandrai D, Sharma TR (2016) Tagging and mapping of SSR markers for rust resistance gene in lentil (Lens culinaris Medik sub sp. culinaris) Ind. J Exp Bot 54:394399
Singh, A., Sharma, V., Dikshit*, H. K., Aski, M., Kumar, H., Thirunavukkarasu, N., et al. (2017). Association mapping unveils favorable alleles for grain iron and zinc concentrations in lentil (Lens culinaris subsp. culinaris). PLoS One 12:e0188296. doi: 10.1371/journal.pone.0188296
Kumar, H., Singh, A., Dikshit*, H.K. et al. (2019) Genetic dissection of grain iron and zinc concentrations in lentil (Lens culinaris Medik.). J Genet 98, 66. https://doi.org/10.1007/s12041-019-1112-3
Neelu Jain et al. 2020. Large-scale stage-specific regulation of gene expression during host-pathogen interactions in CSP44 bread wheat carrying APR gene Lr48. Functional plant Biology https://doi.org/10.1071/FP18336.
Chanchal Sharma, Santosh Kumar, Gautam Saripalli, Neelu Jain et al (2018). H3K4/K9 acetylation and Lr28-mediated expression of six leaf rust responsive genes in wheat (Triticum aestivum). Molecular Genetics and Genomics https://doi.org/10.1007/s00438-018-1500-z
Neha Rai, Amasiddha B., Prashant K. C., Ramya KT, Sushma Rani, Nivedita S., Hari krishna, N Jain et al (2018). Marker‐assisted backcross breeding for improvement of drought tolerance in bread wheat (Triticum aestivum L. em Thell). Plant Breeding 137 (4): 514-526
Bhat J.A., Ali S., Salgotra R. K. , Mir Z.A., Dutta S., JadonV., Tyagi A., Mushtaq M., Jain N. et al (2016). Genomic Selection in the era of Next Generation Sequencing for Complex Traits in Plant Breeding. Front Genet. 7: 221.
Ramya P., Singh G. P., Jain N.et al (2016). Effect of recurrent selection on drought tolerance and related morpho-physiological traits in bread wheat. Plos One PONE-D-15-27038
Dikshit HK, Singh A, Singh D, Aski MS, Prakash P, Jain N et al. (2015) Genetic Diversity in Lens Species Revealed by ESTand Genomic Simple Sequence Repeat Analysis. PLoS ONE 10(9): e0138101. doi:10.1371/journal.pone.0138101
Neelu Jain et al (2013). Discovery of EST-Derived Microsatellite Primers in The Legume Lens culinaris (Fabaceae). Applications in Plant Sciences, 1(7):1200539
Neelu jain and Rajbir yadav. 2009 Genetic diversity analysis among pre-green, post- green era cultivars and wheat landraces using microsatellite markers. Crop and Pasture Science, 60, 303-393
Neelu jain et al 2006. SSR analysis of chromosome 8 regions associated with aroma and cooked kernel elongation in Basmati rice. Euphytica 152: 259-273
Navinder saini, Neelu jain et al. 2004. Assessment of genetic diversity within and among Basmati and non-Basmati rice varieties using AFLP, ISSR and SSR markers. Euphytica.140: 133-146
Das A.K., Muthusamy V., Zunjare R.U., Baveja A., Chauhan H.S., Bhat J.S., Guleria S.K., Kumar B., Saha S. and Hossain F*. (2020). Genetic variability for kernel tocopherols and haplotype analysis of γ-tocopherol methyl transferase (vte4) gene among exotic- and indigenous- maize inbreds. Journal of Food Composition & Analysis. 10.1016/j.jfca.2020.103446 [NAAS score: 8.99]
Chhabra R., Hossain F*., Muthusamy V., Baveja A., Mehta B. and Zunjare R.U. (2019). Development and validation of breeder-friendly functional markers of sugary1 gene encoding starch-debranching enzyme (DBE) involved in enhancing kernel sweetness in maize. Crop and Pasture Science. 70, 868875 [NAAS score: 7.33]
Prakash N.R., Zunjare R.U., Muthusamy V., Chand G., Kamboj M.C., Bhat J.S.and Hossain F*. (2019). Genetic analysis of prolificacy in Sikkim Primitive a prolific maize (Zea mays L.) landrace of North-Eastern Himalaya. Plant Breeding. DOI: 10.1111/pbr.12736. [NAAS score: 7.25]
Chhabra R., Hossain F*., Muthusamy V., Baveja A., Mehta B. and Zunjare R.U. (2019). Mapping and validation of plant anthocyanin-1 pigmentation gene for its effectiveness in early selection of shrunken-2 gene influencing kernel sweetness in maize. Journal of Cereal Science. doi.org/10.1016/j.jcs.2019.04.012. [NAAS score: 8.45]
Das A.K., Chhabra R., Muthusamy V., Chauhan H.S., Zunjare R.U. and Hossain F*. (2019). Identification of novel SNP and InDel variations in the promoter and 5 untranslated regions of γ-tocopherol methyl transferase (ZmVTE4) affecting higher accumulation of α-tocopherol in maize kernel. The Crop Journal. doi.org/10.1016/j.cj.2019.01.004 [NAAS score: 9.18]
Das A.K., Muthusamy V., Zunjare R.U., Chauhan H.S., Sharma P.K., Bhat J.S., Guleria S.K., Saha S. and Hossain F*. (2019). Genetic variability, genotype environment interactions and combining ability analyses of kernel tocopherols among maize genotypes possessing novel allele of γ-tocopherol methyl transferase (ZmVTE4). Journal of Cereal Science. https://doi.org/10.1016/j.jcs.2018.12.018. [NAAS score: 8.45]
Goswami R., Zunjare R., Khan S., Baveja A., Muthusamy V. and Hossain F*. (2019). Marker-assisted introgression of rare allele of β-carotene hydroxylase (crtRB1) gene into elite quality protein maize inbred for combining high lysine, tryptophan and provitamin A in maize. Plant Breeding. DOI: 10.1111/pbr.12676 [NAAS score: 7.25]
Sarika K., Hossain F*., Muthusamy V., Zunjare R.U., Baveja A., Goswami R., Bhat J.S., Saha S. and Gupta H.S. (2018). Marker-assisted pyramiding of opaque2 and novel opaque16 genes for further enrichment of lysine and tryptophan in sub-tropical maize. Plant Science. 272: 142-152 [NAAS score: 9.79]
Zunjare R.U, Hossain F*., Muthusamy M., Baveja A., Chauhan H.S., Bhat J.S., Saha S. and Gupta H.S. (2018). Development of biofortified maize hybrids through marker-assisted stacking of β-carotene hydroxylase, lycopene--cyclase and opaque2 genes. Frontiers in Plant Science. doi: 10.3389/fpls.2018.00178 [NAAS rating: 10.11]
Sarika K., Hossain F*., Muthusamy V., Zunjare R., Goswami R., Thirunavukkarasu N., Jha S.K. and Gupta H.S. (2018). opaque16, a high lysine and tryptophan mutant, does not influence the key physico-biochemical characteristics in maize kernel. Plos One 13(1): e0190945. doi.org/10.1371/journal. [NAAS rating: 8.78]
Yashpal, Rathod DR, Chandra S, Kumar A, Yadav RR, Talukdar Akshay*. 2019. Deploying inter-specific recombinant inbred lines to map QTLs for yield related traits in soybean. Indian J Genet. 79(4): 693-703. DOI: 10.31742/IJGPB.79.4.7
Kumar A, Talukdar Akshay*, Yadav RR, Poonia S, Ranjab R, Lal SK. 2019. Identification of QTLs for seed viability in soybean (Glycine max L. Merr.). Indian J Genet. 79 (4): 713-718. DOI: 10.31742/IJGPB.79.4.9
Reddy YS, Talukdar Akshay*, Dikshit HK, Singh VP, Rana M and Pathania Anju. 2017. Response of different yield components as selection criteria for yield and yield components in early generation of lentil (Lens culinaris Medik.). Legume Res. 40: 160-164
Talukdar Akshay* and Shivakumar M. 2016. Genetic improvement in food-grade soybean: current status and future prospects. Indian J Genet. 76(4): 626-630
Shivakumar M, Verma K, Talukdar Akshay*, Lal SK, Kumar A, Mukherjee K. 2016. Introgression of null allele of Kunitz trypsin inhibitor through marker-assisted backcross breeding in soybean (Glycine max L. Merr.). BMC Genetics 17 (106): 1-9. DOI 10.1186/s12863-016-0413-2
Yashpal, Rathod DR, Devi J, Kumar A, Mukherjee K, Cheruku D, Chandra S, Lal SK and Talukdar Akshay*. 2015. Genomic variation studies in Glycine max and G soja using SSR marker. Curr. Sci. 109(11):1929-1931
Verma K, Talukdar Akshay*, Shivakumar M, Kumar B, Lal SK, Srivastava N, Sapra RL, Harish GD, Girimala V. 2015. Biochemical screening for trypsin inhibitor factors and morpho-molecular characterization of soybean (Glycine max L. Merr.). Indian J. Genet., 75(4): 490-496. DOI: 10.5958/0975-6906.2015.00078.4
Talukdar Akshay*, Shivakumar M, Verma K, Kumar A, Mukherjee K, Lal SK. 2014. Genetic elimination of Kunitz trypsin inhibitors (KTI) from DS9712, an Indian soybean variety. Indian J. Genet. 74 (4) Suppl.: 608-611
Kumar B, Talukdar Akshay*, Verma K, Bala I, Harish GD, Gowda Samrat DS, Lal SK, Sapra RL and Singh KP. 2014. Mapping of yellow mosaic virus (YMV) resistance in soybean (Glycine max L. Merr.) through association mapping approach. Genetica 143: 1-10. DOI: 10. 1007/s 10709-014-9801-6
Kumar B, Talukdar Akshay*, Indu Bala, Verma K, Lal SK, Sapra RL, Namita, Chander S, Tiwari R. 2014. Population structure and association mapping studies for important agronomic traits in soybean. J. Gen. 93 (3): 775-84
Sangeeta Singh, Ajay K. Mahato, Pawan K. Jayaswal, Nisha Singh, Meenakshi Dheer , Preeti Goel, Ranjeet S. Raje, Jeshima K.Yasin, Rohini Sreevathsa, Vandna Rai, Kishor Gaikwad & Nagendra K. Singh (2020). A 62K genic-SNP chip array for genetic studies and breeding applications in pigeonpea (Cajanus cajan L. Millsp.). Scientific Reports, (2020). 10:4960 | https://doi.org/10.1038/s41598-020-61889-0
Sheetal Arora, Ajay Kumar Mahato, Sangeeta Singh, Paritra Mandal, Shefali Bhutani, Sutapa Dutta, Giriraj Kumawat, Bikram Pratap Singh, A. K. Chaudhary, Rekha Yadav, K. Gaikwad, Amitha Mithra Sevanthi, Subhojit Datta, Ranjeet S. Raje, Tilak R. Sharma, Nagendra Kumar Singh (2017). A high-density intraspecific SNP linkage map of pigeonpea (Cajanas cajan L. Millsp.). PloS one, 12(6).
Kumar, P., Sharma, V., Raje, R. S., & Singh, B. (2016). Low-dose gamma irradiation induces water activity, leaf K+/Na+, glycine betaine, antioxidant enzyme activity and reduces lipid peroxidation and protease activity to enhance salt tolerance in pigeonpea (Cajanus cajan (L.) Millsp). Journal of Radioanalytical and Nuclear Chemistry, 308(3), 965-980.
Maibam, A., Tyagi, A., Satheesh, V., Mahato, A. K., Jain, N., Raje, R. S., & Singh, N. K. (2015). Genome-wide identification and characterization of heat shock factor genes from pigeonpea (Cajanus cajan). Molecular Plant Breeding, 6. DOI: 10: 5376/MPB.2015.06.0007
Choudhary, A. K., Raje, R. S., Datta, S., Sultana, R., & Ontagodi, T. (2013). Conventional and molecular approaches towards genetic improvement in pigeonpea for insects resistance. American Journal of Plant Sciences, 4, 372-385.
Dutta, S., Mahato, A. K., Sharma, P., Raje, R. S., Sharma, T. R., & Singh, N. K. (2013). Highly variable Arharsimple sequence repeat markers for molecular diversity and phylogenetic studies in pigeonpea (Cajanus cajan (L.) M illisp.). Plant Breeding, 132(2), 191-196.
Dutta, S., Kumamat, G., Singh, B. P., Gupta, D. K., Singh, S., Dogra, V., Gaikwad, K., Sharma, T. R., Raje, R. S., Bandopadhya, T. K., Datta, S., Singh, M. N., Bashasab, F., Kulwal, P., Wanjari, K.B., Varshney, R., Cook, D. R. and Singh, N. K.(2011). Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea (C. cajan L Millspaugh). BMC Plant Biology, 2011-17.
Singh, D., Raje, R. S. and Choudhary, A. K. (2011). Genetic control of aluminium tolerance in pigeonpea. (Cajanus cajan L.). Crop & Pasture Science 62, 761764.
Singh, N.K., Gupta, D.K. Jayaswal, P.K., Mahato, A.K., Dutta, S., Singh, S., Bhutani, S., Dogra, V., Singh, B.P., Kumawat, G., Pal, J.K., Pandit, A., Singh, A., Hukum Rawal, Akhilesh Kumar, Rama Prashat, G., Khare, A., Yadav, R., Raje, R. S., Singh, M. N., Datta, S., Bashasab Fakrudin, Wanjari, K.B., Rekha Kansal, Dash, P. K., Jain, P.K., Bhattacharya, R., Gaikwad, K., Mohapatra, K., Srinivasan, R. and Sharma, T.R. (2011). The first draft of the pigeonpea genome sequence. Journal of Plant
Singh, D. and Raje, R. S. (2011). Genetics of aluminium tolerance in chickpea (Cicer arietinum L. Millspaugh). Plant Breeding, 130, 563-568.
Bainsla, N. K., Yadav, R., Singh, G. P., & Sharma, R. K. (2020). Additive Genetic Behavior of Stem Solidness in Wheat (Triticum aestivum L.). Scientific Reports, 10(1), 1-9.
A Kumar, R Yadav, V Sagar, KB Gaikwad, N Jain.2017. Genetic and time series analysis for grain growth rate and grain filling duration under conservation agriculture in wheat (Triticum aestivum L.). Indian Journal of Genetics and Plant Breeding (The) 77 (2), 258-265
S Gupta, R Yadav, KB Gaikwad, A Arora, A Kumar, A Kushwah, 2017... Deciphering physiological basis of yield gain in Indian wheat cultivars. Cereal Research Communications, 1-13
V Sagar, R Yadav, KB Gaikwad, S Gupta.2016. Exploring indicator scoring as a selection tool in plant breeding: A study under conservation vs conventional tillage systems. Indian J. Genet 76 (3), 266-273.
S Gupta, R Yadav, K Gaikwad, A Kushwah, AM Singh, NK Bainsla.2016. Genetic improvement trend analysis for end-use quality characteristics among wheat cultivars of North-Western India. The Indian Journal of Genetics and Plant Breeding 76 (2)
V Sagar, R Yadav, N Jain, KB Gaikwad, KV Prabhu.2014. Deciphering yield formation process in wheat under contrasting tillage conditions.Indian Journal of Genetics and Plant Breeding (The) 74 (4), 506-510.
R Yadav, SS Singh, N Jain, G pratap Singh, KV Prabhu.2010. Wheat production in India: Technologies to face future challenges. Journal of Agricultural Science 2 (2), 164-173.
Jain, Neelu and Yadav, Rajbir.2009.Genetic diversity analysis among Pre-green revolution, post-green revolution era cultivars and wheat landraces as revealed by microsatellite markers.Crop and Pasture Science. Vol 60(4): 373-381
R Yadav, KB Gaikwad, R Bhattacharyya. 2017. Breeding wheat for yield maximization under conservation agriculture. Indian Journal of Genetics and Plant Breeding (The) 77 (2), 185-198.
Yadav, Rajbir and Pankaj Sharma. 2004.Genetic diversity for white rust resistance in Indian mustard. Indian Journal of Agricultural Sciences: 74(4): 281-283.
Supriya Sachdeva, C. bharadwaj*, Sarvjeet Singh, Manish Roorkiwal, Vinay Sharma, Anupam Singh and Rajeev Varshney. 2019. Yield plasticity and Molecular Diversity Analysis in Chickpea (Cicer arietinum L.). Indian journal of Agricultural Sciences, 89 (5): 834-41
Supriya Sachdeva, C. Bharadwaj*, Vinay Sharma, B. S. Patil, K. R. Soren, Manish Roorkiwal, Rajeev Varshney and K. V. Bhat. 2018. Molecular and phenotypic diversity among chickpea (Cicer arietinum) genotypes as a function of drought tolerance. Crop and Pasture Science 69(2) 142-153 https://doi.org/10.1071/CP17284
Kumar, Tapan, C. Bharadwaj*, Neha Tiwari, C. Tara Satyavathi, B. S. Patil, Ashutosh Sarker, and Afroz Alam. "Morphological characterization and grouping of chickpea (Cicer arietinum) genotypes for drought tolerance." Indian Journal Of Agricultural Sciences 88, no. 11 (2018): 1740-1745
Sarika Konsam, Bharadwaj Chellapilla*, Ganesh Ram, Tara Satyavathi Chellapilla and Pradeep Kumar Jain. 2014. Molecular diversity of chickpea (Cicer arietinum L.) genotypes differing in their Raffinose Family Oligosaccharides viz., raffinose and stachyose content as revealed through SSR markers. Crop and Pasture Science (formerly: Australian Journal of Crop Science) 8(8): 1175 - 1185
Supriya Sachdeva, Shruti Dawar, Upasana Rani, Basavanagouda Siddanagouda Patil, Khela Ram Soren, Sarvjeet Singh, Satish Kumar Sanwal, Sanjeev K. Chauhan, Chellapilla Bharadwaj. 2019. Identifcation of SSR markers linked to Botrytis grey mould resistance in chickpea (Cicer arietinum). Phytopathologia Mediterranea 58(2)
Bharadwaj C*, Srivastava R, Chauhan S K, Satyavathi C. Tara, Kumar J, Faruqui A, Yadav S, Rizvi AH and Kumar T. 2011. Molecular diversity and phylogeny in geographical collection of chickpea (Cicer sp.) accessions. Journal of Genetics. (Springer) 90, e94e100. http://www.ias.ac.in/jgenet/OnlineResources/90/e94.pdf
Bharadwaj C*, Chauhan SK, Gayatri Rajguru, Rachana Srivastava, Tara Satyavathi C, Shubha Yadav, Aqueel Rizvi, Kumar J and Solanki RK. 2010. Diversity Analysis of Chickpea (Cicer arietinum L) Cultivars using STMS Markers. Indian Journal of Agricultural Sciences. 80 (11): 947-951
Bharadwaj C*, Chauhan S K, Shubha Yadav, Tara Satyavathi C, Rakesh Singh, Kumar J, Rachana Srivastava and Gayatri Rajguru. 2011. Molecular marker-based linkage map of chickpea (cicer arietinum) developed from desi kabulicross. Indian Journal of Agricultural Sciences 81 (2): 11618
Bharadwaj C*,Tara Satyavathi C, Tiwari SP and Karmakar PG. 2002. Genetic base of soybean (Glycine max) varieties released in India as revealed by coefficient of parentage. Indian Journal of Agricultural Sciences, 72(8): 467-69
Bharadwaj, Ch*., Rajesh Mishra, Tara Satyavathi, C., Rao, S. K. and Kumar, K. S. 2007. Genetic variability heritability and genetic advance in some new plant type based crosses of rice (Oryza sativa L.). Indian Journal of Agricultural Research. 41 (3): 189-194
Shidenur S, Singh VJ, Vinod KK, Krishnan SG, Ghritlahre SK, Bollinedi H, Dixit BK, Ellur RK, Nagarajan M, Singh AK, Bhowmick PK (2019) Enhanced grain yield in rice hybrids through complementation of fertility restoration by Rf3 and Rf4 genes as revealed by multi-location evaluation of tropical japonica derived rice (Oryza sativa L.) hybrids. Plant Breeding (Online first) (doi:10.1111/pbr.12818)
Bollinedi H, Yadav AK,Vinod KK, Krishnan SG, Bhowmick PK, Nagarajan M, Neeraja NC, Ellur RK, Singh AK (2020) Genome-wide association study reveal novel QTLs governing the localization of Fe and Zn in the rice grain. Frontiers in Genetics 11:213. (doi:10.3389/fgene.2020.00213)
Singh AK, Krishnan SG, Vinod KK , Ellur RK, Bollinedi H, Bhowmick PK, Nagarajan M (2019) Precision breeding with genomic tools: A decade long journey of molecular breeding in rice. Indian Journal of Genetics and Plant Breeding 79(1 Suppl.):181-191. (doi:10.31742/IJGPB.79S.1.7)
Babu NN, Krishnan SG, Vinod KK, Krishnamurthy SL, Singh VK, Singh MP, Singh R, Ellur RK, Rai V, Bollinedi H, Bhowmick PK, Yadav A, Nagarajan M, Singh NK, Prabhu KV, Singh AK (2017). Marker aided incorporation of Saltol, a major QTL associated with seedling stage salt tolerance, into Oryza sativa Pusa Basmati 1121. Frontiers in Plant Science 8:41. (doi:10.3389/fpls.2017.00041)
Ellur RK, Khanna A, Krishnan GS, Bhowmick PK, Vinod KK, Nagarajan M, Mondal KK, Singh NK, Singh K, Prabhu KV, Singh AK (2016) Marker-aided Incorporation of Xa38, a novel bacterial blight resistance gene, in PB1121 and comparison of its resistance spectrum with xa13 + Xa21. Scientific Reports 6: 29188. (doi: 10.1038/srep29188)
Ellur RK, Khanna A, Yadav A, Pathania S, Rajashekara H, Singh VK, Gopalakrishnan S, Bhowmick PK, Nagarajan M, Vinod KK, Prakash G, Mondal KK, Singh NK, Singh AK (2016) Improvement of Basmati rice varieties for resistance to blast and bacterial blight diseases using marker assisted backcross breeding. Plant Science 242: 330-341 (doi: 10.1016/j.plantsci.2015.08.020)
Meenakumari T, Meenattoor JR, Thirunavoukkarasu M, Vinod KK, Krishan B, Gireesh T, Thomas V, Mydin KK, Jacob J (2018) Dynamics of long-term adaptive responses in growth and rubber yield among Hevea brasiliensis genotypes introduced to a dry sub-humid climate of Eastern India. Industrial Crops and Products 119: 294-303. (doi:10.1016/j.indcrop.2018.02.066)
Vinod KK, Heuer S (2012) Approaches towards nitrogen and phosphorus efficient rice. AoB Plants: pls028 (doi: 10.1093/aobpla/pls028)
Singh VK, Singh A, Singh SP, Ellur RK, Singh D, Krishnan SG, Bhowmick PK, Nagarajan M, Vinod KK, Singh UD, Mohapatra T, Prabhu KV, Singh AK (2013) Marker assisted simultaneous but stepwise backcross breeding for pyramiding blast resistance genes Piz5 and Pi54 into an elite Basmati rice restorer line PRR78. Plant Breeding 132(5): 486495 (doi:10.1111/pbr.12077)
Singh VK, Singh A, Singh SP, Ellur RK, Choudhary V, Sarkel S, Singh D, Krishnan SG, Nagarajan M, Vinod KK, Singh UD, Rathore R, Prashanthi SK, Aggrawal PK, Bhatt JC, Mohapatra T, Prabhu KV, Singh AK. (2012) Incorporation of blast resistance into "PRR78", an elite Basmati rice restorer line, through marker assisted backcross breeding. Field Crops Research 128: 8-16 (doi:10.1016/j.fcr.2011.12.003)
Gopala Krishnan S, Waters DLE, Katiyar SK, Sadananda AR, Satyadev V and Henry RJ. 2012. Genome-wide DNA polymorphisms in elite indica rice inbreds discovered by whole-genome sequencing. Plant Biotechnology Journal 10(6): 623-634.
Gopala Krishnan S, Waters DLE and Henry RJ. 2014. Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome. PLoS ONE 9(6): e98843. doi: 10.1371/journal.pone.0098843.
Gopala Krishnan S, Singh JP and Dwivedi NK. 2011. Primitive weedy forms of guar, adak guar: possible missing link in the domestication of guar [Cyamopsis tetragonoloba (L.) Taub.]. Genetic Resources and Crop Evolution 58(7): 961-966.
Joseph M$, Gopala Krishnan S$, Sharma RK, Singh VP, Singh AK, Singh NK and Mohapatra T. 2004. Combining bacterial blight resistance and Basmati quality characteristics by phenotypic and molecular marker assisted selection in rice. Molecular Breeding 13(4); 377-387. $Equally contributed.
Gopala Krishnan S, Sharma RK, Rajkumar KA, Joseph M, Singh VP, Singh AK, Bhat KV, Singh NK and Mohapatra T. 2008. Integrating marker assisted background analysis with foreground selection for identification of superior bacterial blight resistant recombinants in Basmati rice. Plant Breeding 127: 131-139.
Dwivedi P, Ramawat N, Raju D, Dhawan G, Gopala Krishnan S, Chinnusamy V, Bhowmick PK, Vinod KK, Pal M, Nagarajan M, Ellur RK, Bollinedi H and Singh AK (2022) Drought tolerant near isogenic lines of Pusa 44 pyramided with qDTY2.1 and qDTY3.1, show accelerated recovery response in a high throughput phenomics based phenotyping. Front. Plant Sci. 12:752730. doi: 10.3389/fpls.2021.752730.
Senapati M, Tiwari A, Sharma N, Chandra P, Bashyal BM, Ellur RK, Bhowmick PK, Bollinedi H, Vinod KK, Singh AK and Gopala Krishnan S (2022) Rhizoctonia solani Khn pathophysiology: Status and prospects of sheath blight disease management in rice. Front. Plant Sci. 13:881116. doi: 10.3389/fpls.2022.881116.
Ravikiran KT, Gopala Krishnan S, Abhijith KP, Bollinedi H, Mariappan N, Vinod KK, Bhowmick PK, Singh MP, Ellur RK, Singh AK (2022) Genome wide association mapping reveals novel putative gene candidates governing reproductive stage heat stress tolerance in rice. Frontiers in Genetics 13:876522. doi: 10.3389/fgene.2022.876522.
Oo KS, Gopala Krishnan S, Vinod KK, Dhawan G, Dwivedi P, Kumar P, Bhowmick PK, Pal M, Chinnusamy V, Nagarajan M, Bollinedi H, Ellur RK and Singh AK (2021) Molecular Breeding for Improving Productivity of Oryza sativa L. cv. Pusa 44 under Reproductive Stage Drought Stress through Introgression of a Major QTL, qDTY12.1. Genes. 12(7):967. https://doi.org/10.3390/genes12070967.
Dhawan G, Kumar A, Dwivedi P, Gopala Krishnan S, Pal M, Vinod KK, Nagarajan M, Bhowmick PK, Bollinedi H, Ellur RK, Ravikiran KT, Kumar P and Singh AK. 2021. Introgression of qDTY1.1 governing reproductive 3 stage drought tolerance into an elite Basmati rice variety Pusa Basmati 1 through marker assisted backcross breeding. Agronomy, 11(2): 202. https://doi.org/10.3390/ agronomy11020202.
R. Dixit, M. Singh, A. Singh, J. K. Pal, A. Pandit, P. K. Singh, A. K. Mahato, V. Dogra, K. Gaikwad, T. R. Sharma, T. Mohapatra, N. K. Singh (IARI), Tomato Genome Consortium (2012). The tomato genome sequence provides insights into fleshy fruit evolution. Nature, (485): 635641, (31 May 2012) doi:10.1038/nature11119.
Rice genome consortia for 11 and 12 chromosome (IIRGS) IARI: N. K. Singh, T. Mohapatra, T. R. Sharma, K. Gaikwad, A. Singh, V. Dalal, S. K. Srivastava, A. Dixit, A. K. Pal, I. A . Ghazi, M. Yadav, A. Pandit, A. Bhargava, K. Sureshbabu, R. Dixit, H. Singh, S. C. Swain, S. Pal, M. Ragiba, P. K. Singh, V. Singhal, S.D. Mendiratta and K. Batra (2005). The sequence of rice chromosome 11 and 12, rich in disease resistance genes and recent gene duplications. BMC biology. 3, 1-18.
Tomato Genome Sequencing Consortia (Indian Initiative for Tomato Genome Sequencing (IITGS), Indian Agricultural Research Institute): A. Pandit, P.K. Singh, A. Kumar, R. Dixit, A. Singh, S. Praveen, V. Dalal, M. Yadav, I.A. Ghazi, K. Gaikwad, T.R. Sharma, T. Mohapatra and N.K. Singh) (2009). A Snapshot of the Emerging Tomato Genome Sequence: The Tomato Genome Sequencing Consortium, The Plant Genome. 2(1), 78-92. doi: 10.3835/plantgenome2008.06.0321.
Anuradha Singh, Pradeep K. Singh, Rakesh Singh, Awadhesh Pandit, Ajay K. Mahato, Deepak K. Gupta, Kuldeep Tyagi, Ashok K. Singh, Nagendra K. Singh and Tilak R. Sharma (2010). SNP haplotypes of the BADH1 gene and their association with aroma in rice (Oryza sativa L.), Molecular Breeding, 26 (2), 325-338. DOI 10.1007/s11032-010-9425-1
Nagendra K. Singh, Vivek Dalal, Kamlesh Batra, Binay K. Singh, G. Chitra, Archana Singh, Irfan A. Ghazi, Mahavir Yadav, Awadhesh Pandit, Rekha Dixit, Pradeep K. Singh, Harvinder Singh, Kirpa R. Koundal, Kishor Gaikwad, Trilochan Mohapatra and Tilak R. Sharma (2007). Single-copy genes define a conserved order between rice and wheat for understanding differences caused by duplication, deletion, and transposition of genes, Functional & Integrative Genomics, 7 (1): 17-35.
Prasanta K. Subudhi, Teresa B. De Leon, Ronald Tapia, Chenglin Chai, Ratna Karan, John Ontoy and Pradeep K. Singh (2018). Genetic interaction involving photoperiod-responsive Hd1 promotes early flowering under long-day conditions in rice. Scientific Report. 8:2081, DOI:10.1038/s41598-018-20324-1
Prasanta K. Subudhi, Pradeep K. Singh, Teresa DeLeon, Arnold Parco, Ratna Karan, Hanamareddy Biradar, Marc A. Cohn, and Takuji Sasaki (2013). Mapping of Seed Shattering Loci Provides Insights into Origin of Weedy Rice and Rice Domestication. Journal of Heredity, 105 (2), 276-287. doi:10.1093/jhered/est089
N. Rai, A. Bellundagi, P.K.C. Kumar, R. K.Thimmappa, S. Rani, N. Sinha, Harikrishna, N. Jain, G. P. Singh, P. K. Singh, S. Chand and K. V. Prabhu (2018). Marker-assisted backcross breeding for improvement ofdrought tolerance in bread wheat (Triticum aestivum L. emThell). Plant Breeding. 137:514526. https://doi.org/10.1111/pbr.12605
P. K. Subudhi, A. Parco, P. K. Singh, T. DeLeon, R. Karan, H. Biradar, M. A. Cohn, D. S. Brar and T. Sasaki (2012). Genetic Architecture of Seed Dormancy in U.S. Weedy Rice in Diff erent Genetic Backgrounds. Crop Science, (52): 25642575, doi:10.2135/cropsci2012.04.0228
P R, Singh GP, Jain N, Singh PK, Pandey MK, Sharma K, Kumar A, Harikrishna and Prabhu KV. (2016). Effect of Recurrent Selection on Drought Tolerance and Related Morpho-Physiological Traits in Bread Wheat. PLoS ONE 11(6), 1-17. e0156869. doi:10.1371/journal.pone.0156869
Singh D., * Singh, C.K., Tomar, R.S.S., Sharma, S., Karwa, S., Pal, M., Singh, V., Sanwal, S.K. and Sharma, P.C (2020). Genetics and molecular mapping for salinity stress tolerance at seedling stage in lentil (Lens culinaris Medik). Crop Science. 113. https://doi.org/10.1002/csc2.
Singh, D. *., Singh, C.K., Tribuvan, K.U., Tyagi, P., Taunk, J., Tomar, R.S.S., Kumar, S., Tripathi, K., Kumar, A., Gaikwad, K., Yadav, R.K. and Pal, M (2020). Development, characterization and cross species/genera transferability of novel EST-SSR markers in lentil, with their molecular applications. Plant Molecular Biology Reporter 38:114129 https://doi.org/10.1007/s11105-019-01184-z.
Singh, D. *, Singh, C. K., Pal, M and Kishor, G (2019). Genome-wide transcriptome analysis reveals vital role of heat responsive genes in regulatory mechanisms of lentil (Lens culinaris Medikus). Scientific Reports,| 9:12976 | https://doi.org/10.1038/s41598-019-49496-0.
Singh, D.*, Singh, C.K., Singh, Y.P., Singh, R., Tomar, R.S.S., Karwa, S., Mishra, V.K., Sarkar, S.K., Pal, M., Kumar, A., Yadav, R.K (2018). Evaluation of cultivated and wild genotypes of Lens species under alkalinity stress and their molecular collocation using microsatellite markers. PLOS One 13(8): e0199933. https://doi.org/10.1371/ journal.pone.0199933.
Singh, D. *, Singh, C.K., Tomar, R.S.S. and Pal, M. (2017). Genetics and molecular mapping of heat tolerance for seedling survival and pod set in lentil. Crop Science, 57:30593067. DOI: 10.2135/cropsci2017.05.0284.
Singh, D. *, Singh, C. K., Kumari, S., Tomar, R.S.S., Karwa, S., Singh, R., Singh, R.B., Sarkar S.K., Pal, M (2017). Discerning morpho-anatomical, physiological and molecular multiformity in cultivated and wild genotypes of lentil with reconciliation to salinity stress. PLOS One. 12(5): e0177465.
Singh, D. *, Singh, C.K., Taunk, J., Tomar, R.S.S., Chaturvedi, A.S., Gaikwad, K., Pal, M (2017). Transcriptome analysis of lentil (Lens culinaris Medikus) in response to seedling drought stress. BMC Genomics, 18:206. DOI 10.1186/s12864-017-3596-7.
Singh, D. *, Singh, C.K., Tomar, R.S.S., Taunk, J., Singh, R., Maurya, S., Chaturvedi, A. K., Pal, M., Singh, R., and Dubey, S.K (2016). Molecular assortment of Lens species with different adaptations to drought conditions using SSR markers. PLoS One. 11(1): e0147213, doi:10.1371/ journal.pone.0147213.
Singh, D. *, Pal, M., Singh, C.K., Jyoti, T., Jain P., Chaturvedi, A.K, Sadhana, M., Karwa S., Singh, R., Tomar, R.S.S., Singh, N. Rita, C. Nandini and Singh M.P (2016). Molecular scanning and morpho-physiological dissection of component mechanism in Lens species in response to aluminium stress. PLoS One. DOI:10.1371/journal.pone.0160073.
Singh, D. *, Singh, C.K., Jyoti, T. and Tomar, R.S.S. (2016). Genetic analysis and molecular mapping of seedling survival drought tolerance gene in lentil (Lens culinaris Medik). Molecular Breeding, 36:58.
Navinder Saini, Yashpal, Murali Krishna Koramutla, Naveen Singh, Satbeer Singh, Rajendra Singh, Sangita Yadav, Ramcharan Bhattacharya, Sujata Vasudev & D. K. Yadava Promoter polymorphism in FAE1.1 and FAE1.2 genes associated with erucic acid content in Brassica juncea. Mol Breeding 39, 75 (2019). https://doi.org/10.1007/s11032-019-0971-x
Dhillon, M.K., Hasan, F., Tanwar, A.K. et al. Genetic regulation of diapause and associated traits in Chilo partellus (Swinhoe). Sci Rep 10, 1793 (2020). https://doi.org/10.1038/s41598-020-58640-0
B Vanlalneihi, Partha Saha, P Kalia, Sarika Jaiswal, Aditi Kundu, ND Saha, Shrawan Singh Sirowa, Naveen Singh Chemometric approach based characterization and selection of mid-early cauliflower for bioactive compounds and antioxidant activity. J Food Sci Technol 57, 293300 (2020). https://doi.org/10.1007/s13197-019-04060-6
Gaikwad, KB, Singh, N, Bhatia, D, et al. Reinventing heterosis phenomenon through deployment of alien introgression lines in rice (Oryza sativa L.). Plant Breed. 2019; 138: 277 289. https://doi.org/10.1111/pbr.12692
Gulshan Mahajan, Kuldeep Singh, Naveen Singh, Rupinder Kaur & Bhagirath S Chauhan (2018) Screening of water-efficient rice genotypes for dry direct seeding in South Asia, Archives of Agronomy and Soil Science, 64:1, 103-115, DOI: 10.1080/03650340.2017.1337891
Dhillon MK, Singh Naveen, Tanwar Aditya K, Yadava DK and Vasudeva Sujata.Standardization of screening techniques for resistance to Lipaphis erysimi (Kalt.) in rapeseed-mustard under field conditions. Indian Journal of Experimental Biology 2018, 56(9): 674-685.
L. Prasad, D. Kamil, N. Singh, O.W. Singh, D.K. Yadava, T. Prameela Devi.FIRST REPORT OF FUSARIUM EQUISETI CAUSING STEM AND ROOT ROT ON BRASSICA JUNCEA IN INDIA. Journal of plant pathology 2017, 99(3): 799 DOI: http://dx.doi.org/10.4454/jpp.v99i3.3924
Navinder Saini, Naveen Singh, Anil Kumar, Nitika Vihan, Sangita Yadav, Sujata Vasudev, D.K. Yadava.Development and validation of functional CAPS markers for the FAE genes in Brassica juncea and their use in marker-assisted selection. Breeding Science 2016, 66: 831837 (2016) doi:10.1270/jsbbs.16132
Gaikwad KB, Singh N, Bhatia D, Kaur R, Bains NS, Bharaj TS, et al. (2014) Yield-Enhancing Heterotic QTL Transferred from Wild Species to Cultivated Rice Oryza sativa L. PLoS ONE 9(6): e96939. https://doi.org/10.1371/journal.pone.0096939
Bhatia, D., Sharma, R., Vikal, Y., Mangat, G., Mahajan, R., Sharma, N., Lore, J.S., Singh, N., Bharaj, T.S. and Singh, K. (2011), Marker‐Assisted Development of Bacterial Blight Resistant, Dwarf, and High Yielding Versions of Two Traditional Basmati Rice Cultivars. Crop Sci., 51: 759-770. doi:10.2135/cropsci2010.06.0358
Basu Udita, Narnoliya Laxmi, Srivastava Rishi, Sharma Akash, Bajaj Deepak, Daware Anurag, Thakro Virevol, Malik Naveen, Upadhyaya Hari, Tripathi Shailesh, Hegde VS, Tyagi Akhilesh and Parida Swarup Kumar (2019). CLAVATA signaling pathway genes modulating flowering time and flower number in chickpea. Theoretical and Applied Genetics 1-22
Basu, Udita; Bajaj, Deepak; Sharma, Akash; Malik, Naveen; Daware, Anurag; Laxmi, Laxmi; Thakro, Virevol ; Upadhyaya, Hari; Kumar, Rajendra; Tripathi, Shailesh; Bharadwaj, C; Tyagi, Akhilesh; Parida, Swarup Kumar (2019). ABC transporter-mediated transport of glutathione conjugates enhances seed yield and quality in chickpea. Plant Physiology 180: 253-275
Pooran M Gaur, Srinivasan Samineni, Mahendar Thudi, Shailesh Tripathi, Sobhan B Sajja, Veera Jayalakshmi, DM Mannur, AG Vijayakumar, NVPR Ganga Rao, Chris Ojiewo, Asnake Fikre, Paul Kimurto, Robert O Kileo, Nigusie Girma, Sushil K Chaturvedi, and Rajeev K Varshney (2018). Integrated breeding approaches for improving drought and heat adaptation in chickpea (Cicer arietinum L.). Plant Breeding 1-12
Nitish R Prakash, Rajesh K Singh, S K Chauhan, Mukesh K Sharma, C Bharadwaj, V S Hegde, P K Jain. P M Gaur and Shailesh Tripathi (2017). Tolerance to post-emergence herbicide Imazethapyr in chickpea. Indian J Genetics., 77(3): 400-407
Pooran M Gaur, Srinivasan Samineni, Shailesh Tripathi, RK Varshney and CLL Gowda (2015) Allelic relationships of flowering time genes in chickpea. Euphytica 203: 295-308
Hari D Upadhyaya, Deepak Bajaj, Rishi Srivastava, Anurag Daware, Udita Basu, Shailesh Tripathi, Chellapilla Bharadwaj, Akhilesh K Tyagi and Swarup K Parida (2017). Genetic dissection of plant growth habit in chickpea. Functional & Integrative Genomics 17: 711-723
Tripathi S, Singh A K and Pandey R L (2011). Evaluation of dwarf fieldpea (Pisum sativum L.)) genotypes for yield and related attributes and their interrelationships. Indian J of Agricultural Sciences Vol 84 (1); 377-9
Shailesh Tripathi, Vindla Sridhar, Aravind K. Jukanti, Kamatam Suresh, B. V. Rao, C. L. L. Gowda and Pooran M. Gaur (2012). Genetic variability and interrelationships of phenological, physicochemical and cooking quality traits in chickpea. Plant Genetic Resources: Characterization and Utilization 10(3); 194201
S.Tripathi, M.Z.K. Warsi and S.S. Verma (2003). Waterlogging tolerance in inbred lines of maize (Zea mays L.). Cereal Research Communications, Hungary, Vol. 31, Nos 1-2: 221-226.
Divakara BN, Alur AS and Tripathi S (2010). Genetic variability and relationship of pod and seed traits in Pongamia pinnata (L.) Pierre, a potential agroforestry tree. International Journal of Plant Production 4(2): 129-141
Singhal, T., C. Tara Satyavathi, Kumar A., S. Mukesh Sankar, Singh, S.P., C. Bharadwaj, J. Aravind, N. Anuradha, Meena, M. C. and Singh, N. 2018. Genotype x environment interaction and genetic association of grain iron and zinc content with other agronomic traits in RIL population of pearl millet. Crop & Pasture Science, 69, 10921102 https://doi.org/10.1071/CP18306.
C. Tara Satyavathi, Singh, S.P., Mukesh Sankar S., Bhat, J., Rajkumar, Kanhaiya, K., Verma, A.P.S., M.B. Arun Kumar and Rajkumar. 2018. Notification of crop varieties and registration of germplasm: Pearl millet variety Pusa Composite 701 (MP 535). Indian J. Genet., 78 (2): 282.
Singh, S.P., C. Tara Satyavathi, Mukesh Sankar S., Rajkumar, Kanhaiya, K., Verma, A.P.S., Narayan, M., Bhat, J., M.B. Arun Kumar, Singh, G., Bana, R.S. and Rajkumar. 2018. Notification of crop varieties and registration of germplasm: Pearl millet hybrid Pusa 1201 (MH 1849). Indian J. Genet., 78 (2): 282. (NAAS: 6.41)
Anuradha N, Satyavathi CT, Bharadwaj C, Nepolean T, Sankar SM, Singh SP, Meena MC, Singhal T and Srivastava RK (2017) Deciphering Genomic Regions for High Grain Iron and Zinc Content Using Association Mapping in Pearl Millet. Front. Plant Sci. 8:412.doi: 10.3389/fpls.2017.00412. (NAAS: 10.30).
Anuradha N., C. Tara Satyavathi, Meena, M.C., S. Mukesh Sankar, Bharadwaj, C., Bhat, J., Singh, O. and Singh, S.P. 2017. Evaluation of pearl millet [Pennisetum glaucum (L.) R. Br.] for grain iron and zinc content in different agro climatic zones of India. Indian J. Genet., 77 (1): 65-73.
Tripti Singhal, C. Tara Satyavathi, S. P. Singh, S. Mukesh Sankar, N. Anuradha, C. Bharadwaj, Aruna Kumar, M. Mallik and Nirupma Singh. 2019. Identification of new stable and high iron rich fertility restorers in pearl millet. Indian J. Genet., 79(3) 552-562 (2019) DOI: 10.31742/IJGPB.79.3.4.
Jorben J., Singh S. P., C. Tara Satyavathi, S. Mukesh Sankar, Bhat J. S., Kumar D. and Mallik M. 2020. Inheritance of fertility restoration of A4 cytoplasm in pearl millet [Pennisetum glaucum (L.) R. Br.]. Indian J. Genet., 80 (1) online.
Mondal, B., S. P. Singh and D. C. Joshi. 2014. DUS characterization of rice (Oryza sativa L.) using morphological descriptors and quality parameters. Outlook on Agriculture, 43, 2: 131-137, doi:10.5367/oa.2014.0167
Balwant Singh, S. P. Singh and J. Kumar. 2011. Assessment of genetic diversity in aromatic rices (O. Sativa L.) using morphological, physiochemical and SSR markers. Indian J. Genet., 71, 3: 214-222.
S. P. Singh and A. Q. Khan. 1998. Selection indices for cane yield in sugarcane. Indian J. Genet., 58 (3): 353-357.
Babu P, Baranwal DK, Harikrishna, Pal D, Bharti H, Joshi P, Thiyagarajan B, Gaikwad KB, Bhardwaj SC, Singh GP and Singh A (2020) Application of Genomics Tools in Wheat Breeding to Attain Durable Rust Resistance. Front. Plant Sci. 11:567147. doi: 10.3389/fpls.2020.567147
Kanwal M, Qureshi N, Gessese M, Forrest K, Babu P, Bariana H, Bansal U. (2021). An adult plant stripe rust resistance gene maps on chromosome 7A of Australian wheat cultivar Axe. Theoretical and Applied Genetics, 134(7):2213-2220. (NAAS rating: 11.69, 5.699)
Qureshi, N., Kandiah, P., Gessese, M.K., Nsabiyera, V., Wells, V., Babu, P., Wong, D., Hayden, M.J., Bariana, H., & Bansal, U.K. (2018). Development of co-dominant KASP markers co-segregating with Ug99 effective stem rust resistance gene Sr26 in wheat. Molecular Breeding, 38:1-9.
Bariana, H.S.; Babu, P.; Forrest, K.L.; Park, R.F.; Bansal, U.K. Discovery of a New Leaf Rust Resistance Gene Lr82 in Wheat: Molecular Mapping and Marker Development. Genes 2022, 13
Yadav R, Gupta S, Gaikwad KB, Bainsla NK, Kumar M, Babu P, Ansari R, Dhar N, Dharmateja P and Prasad R (2021) Genetic Gain in Yield and Associated Changes in Agronomic Traits in Wheat Cultivars Developed Between 1900 and 2016 for Irrigated Ecosystems of Northwestern Plain Zone of India. Frontiers in Plant Science 12:719394. doi: org/10.3389/fpls.2021.719394 (NAAS Score: 10.40)
Dharmateja P, Kumar M, Pandey R, Mandal PK, Babu P, Bainsla NK, Gaikwad KB, Tomar V, Kranthi Kumar K, Dhar N, Ansari R, Saifi N, Yadav R. Deciphering the change in root system architectural traits under limiting and non-limiting phosphorus in Indian bread wheat germplasm. PLoS One. 2021 Oct 1;16(10):e0255840. doi: 10.1371/journal.pone.0255840.
Gaikwad, K. B., Rani, S., Kumar, M., Gupta, V., Babu, P. H., Bainsla, N. K., & Yadav, R. (2020). Enhancing the nutritional quality of major food crops through conventional and genomics-assisted breeding. Frontiers in nutrition, 7, 533453. (NAAS rating: 12.57, 6.576)
Pal, D., Bhardwaj, S.C., Sharma, P. et al. Molecular marker aided selection for developing rust resistant genotypes by pyramiding Lr19/Sr25 and Yr15 in wheat (Triticum aestivum L.). Australasian Plant Pathol. (2020). https://doi.org/10.1007/s13313-020-00738-0
Rumesh Ranjan, Rajbir Yadav, Kiran Gaikwad, Manjeet Kumar, Naresh Kumar, Prashanth Babu, Renu Pandey, Arun K Joshi (2021). Genetic variability for root traits and its role in adaptation under conservation agriculture in spring wheat. Indian J. Genet., 81(1): 24-33. (NAAS rating: 6.55, 0.55)
Kiran B. Gaikwad, Naveen Singh, Parampreet Kaur, Sushma Rani, Prashanth Babu H, Kuldeep Singh (2021). Deployment of wild relatives for genetic improvement in rice (Oryza sativa). Plant Breeding, 140:2352. (NAAS rating: 7.832, 1.832)
Shidenur S, Singh V J, Vinod K K, Gopala K S, Ghritlahre S K, Bollinedi H, Ellur R K, Dixit B K, Nagarajan M, Singh A K and Bhowmick P K (2020) Enhanced grain yield in rice hybrids through complementation of fertility restoration by Rf3 and Rf4 genes as revealed by multilocation evaluation of tropical japonica derived rice (Oryza sativa) hybrids. Plant Breeding, https://doi.org/10.1111/pbr.12818
Shidenur S, Singh V J, Vinod K K, Gopala K S, Ghritlahre S K, Bollinedi H, Ellur R K, Dixit B K, Nagarajan M, Singh A K and Bhowmick P K (2019) Molecular detection of WA‐CMS restorers from tropical japonica‐derived lines, their evaluation for fertility restoration and adaptation. Plant Breeding 38 (5): 553-567
Bollinedi H, Lad JD, Gopala Krishnan S, Bhowmick PK, Prabhu KV, Singh NK and Singh AK (2019) Kinetics of β-carotene degradation under different storage conditions in transgenic Golden Rice lines. Food Chemistry 278: 773779. (NAAS ID F038; NAAS Score 10.53)
Fiyaz AR, Yadav AK, Gopala Krishnan S, Ellur RK, Bashyal BM, Grover N, Bhowmick PK, Nagarajan M,Vinod KK, Singh NK, Prabhu KV and Singh AK (2016) Mapping quantitative trait loci responsible for resistance to Bakanae disease in rice. Rice 9:45. DOI 10.1186/s12284-016-0117-2.
Babu NN, Gopala Krishnan S, Vinod KK, Krishnamurthy SL, Singh VK, Singh MP, Singh R, Ellur RK, Rai V, Bollinedi H, Bhowmick PK, Yadav A, Mariappan N, Singh NK, Prabhu K and Singh AK (2017) Marker aided incorporation of Saltol, a major QTL associated with seedling stage salt tolerance, into Oryza sativa Pusa Basmati 1121. Front. Plant Sci. 8: 41. doi: 10.3389/fpls.2017.00041
Ellur RK, Khanna A, Gopala Krishnan S, Bhowmick PK, Vinod KK, Nagarajan M, Mondal KK, Singh NK, Singh K, Prabhu KV and Singh AK (2016) Marker-aided Incorporation of Xa38, a Novel Bacterial Blight Resistance Gene, in PB1121 and Comparison of its Resistance Spectrum with xa13+Xa21. Scientific Reports 6: 29188
Ellur RK, Khanna A, Yadav A, Pathania S, Rajashekara H, Singh VK, Gopala Krishnan S, Bhowmick PK, Nagarajan M, Vinod KK, Prakash G, Mondal KK, Singh NK, Prabhu KV and Singh AK (2016) Improvement of Basmati rice varieties for resistance to blast and bacterial blight diseases using marker assisted backcross breeding. Plant Sci. 242: 330-341.
Khanna A, Sharma V, Ellur RK, Shikari AB, Gopala Krishnan S, Singh UD, Prakash G, Sharma TR, Rathour R, Variar M, Prashanthi SK, Nagarajan M, Vinod KK, Bhowmick PK, Singh NK, Prabhu KV, Singh BD and Singh AK (2015) Development and evaluation of near isogenic lines for major blast resistance gene(s) in Basmati rice. Theor. Appl. Genet. DOI: 10.1007/s00122-015-2502-4.
Singh, A., Singh, V.K., Singh, S.P., Pandian, R.T.P., Ellur, R.K., Singh, D., Bhowmick, P.K., Gopala Krishnan, S., Nagarajan, M., Vinod, K.K., Singh, U.D., Prabhu, K.V., Sharma, T.R., Mohapatra, T. and Singh, A.K. 2012. Molecular breeding for the development of multiple disease resistant Basmati rice. AoB Plants: pls029 (doi: 10.1093/aobpla/pls029)
Kumar A, Singh V J, Krishnan S G, Vinod K K, Bhowmick P K, Nagarajan M, Ellur Ranjith, Bollinedi H and Singh A K (2019). WA-CMS-based iso-cytoplasmic restorers derived from commercial rice hybrids reveal distinct population structure and genetic divergence towards restorer diversification. 3 Biotech 9, 299. https://doi.org/10.1007/s13205-019-1824-3
Katral A, Muthusamy V*, Zunjare RU, Chhabra R, Maman S, Yadava DK and Hossain F (2022) Allelic variation in Zmfatb gene defines variability for fatty acids composition among diverse maize genotypes. Frontiers in Nutrition 9:845255 https://doi.org/10.3389/fnut.2022.845255 (NAAS Rating: F090a/12.58) (IF: 6.576)
Ragi S, Muthusamy V*, Zunjare RU, Bhatt V, Katral A, Abhijith KP, Chand G, Mishra SJ, Sekhar JC, Yadava DK and Hossain F (2022) Genetic variation for grain phytate and molecular characterization of low phytic acid-2 (lpa2) gene-based maize (Zea mays L.) inbreds. Plant Breeding 141:212222 https://doi.org/10.1111/pbr.13006 (NAAS Rating: P098/ 7.83) (IF: 1.83)
Ragi S, Muthusamy V*, Zunjare RU, Bhatt V, Katral A, Abhijith KP, Kasana R, Gain N, Sekhar JC, Yadava DK and Hossain F (2021) Genetic and molecular characterization of sub-tropically adapted low phytate genotypes for utilization in mineral biofortification of maize (Zea mays L.). Crop and Pasture Science https://doi.org/10.1071/CP21104 (NAAS rating: C168/ 8.29) (IF: 2.286)
Dutta S, Muthusamy V*, Chhabra R, Baveja A, Zunjare RU, Mondal TK, Yadava DK and Hossain F (2020) Low expression of carotenoids cleavage dioxygenase 1 (ccd1) gene improves the retention of provitamin-A in maize grains during storage. Molecular Genetics and Genomics 296:141-153 https://doi.org/10.1007/s00438-020-01734-1 (NAAS rating: M081/ 9.29) (IF: 3.09)
Dutta S, Muthusamy V*, Hossain F, Baveja A, Chhabra R, Jha SK, Yadava DK and Zunjare RU (2020) Analysis of genetic variability for retention of kernel carotenoids in sub-tropically adapted biofortified maize under different storage conditions. Journal of Cereal Science 93: 102987 https://doi.org/10.1016/j.jcs.2020.102987 (NAAS rating: J135/ 9.62) (IF: 3.62)
Dutta S, Muthusamy V*, Hossain F, Baveja A, Abhijith KP, Saha S, Zunjare RU and Yadava DK (2020) Effect of storage period on retention of provitamin-A carotenoids in biofortified maize hybrids. International Journal of Food Science and Technology https://doi.org/10.1111/ijfs.14785(NAAS rating: I249/ 9.71) (IF: 3.44)
Abhijith KP, Muthusamy V*,Chhabra R, Dosad S, Bhatt V, Chand G, Jaiswal SK, Zunjare RU, Vasudev S, Yadava DK and Hossain F (2020) Development and validation of breeder friendly gene based markers for lpa1 1 and lpa2 1 genes conferring low phytic acid in maize kernel. 3Biotech 10:121 https://doi.org/10.1007/s13205-020-2113-x(NAAS rating: B134/ 8.41) (IF: 2.41)
Dutta S, Muthusamy V*, Chhabra R. Zunjare RU and Hossain F (2020) Two-step method for isolation of high-quality RNA from stored seeds of maize rich in starch. 3Biotech 10: DOI: 10.1007/s13205-020-02424-w (NAAS rating: B134/ 8.41) (IF: 2.41)
Muthusamy V, Hossain F, Thirunavukkarasu N, Pandey N, Vishwakarma AK, Saha S and Gupta HS (2015) Molecular characterization of exotic and indigenous maize inbreds for biofortification with kernel carotenoids. Food Biotechnology 29:276-295DOI: 10.1080/08905436.2015.1059768 (NAAS rating: F038/ 7.56) (IF: 1.51)
Muthusamy V, Hossain F, Thirunavukkarasu N, Choudhary M, Saha S, Bhat JS, Prasanna BM and Gupta HS (2014) Development of ?-carotene rich maize hybrids through marker-assisted introgression of ?-carotene hydroxylase allele. PLoS ONE 9(12): e113583 doi:10.1371/ journal.pone.0113583 (NAAS rating: P004/ 9.24) (IF: 3.04)
Kumar Durgesh, Rekha Joshi, Kuldeep Kumar, Kishor Gaikwad, RS Raje, G Rama Prashat (2019). Inheritance pattern of cold tolerance in pigeonpea [Cajanus cajan (L.) Millsp.] Indian J. Genet, 79 (2), 404-410. (NAAS rating: I064/ 6.47)
KB Wanjari, RS Raje, K Durgesh, GR Prashat, R Joshi (2016). Pigeonpea improvement through conventional breeding. Indian J. Genet 76 (4), 483-495. (NAAS rating: I064/ 6.47)
N K Singh, D K Gupta, .....G R Prashat, ....Tilak R Sharma (2012). The first draft of the pigeonpea genome sequence. Journal of plant biochemistry and biotechnology 21(1) 98-112. (NAAS rating: J418/ 7.04)
Gaikwad, K. B., Singh, N., Bhatia, D., Kaur, R., Bains, N. S., Bharaj, T. S., & Singh, K. (2014). Yield-enhancing heterotic QTL transferred from wild species to cultivated rice Oryza sativa L. PLoS One, 9(6).
Gaikwad, K. B., Singh, N., Bhatia, D., Kaur, R., Bains, N. S., Bharaj, T. S., & Singh, K. (2019). Reinventing heterosis phenomenon through deployment of alien introgression lines in rice (Oryza sativa L.). Plant Breeding, 138(3), 277-289.
Gaikwad, K. B., Singh, N., Bhatia, D., Sharma, N., Bains, N. S., Bharaj, T. S., & Singh, K. (2018). Heterotic response of genomic regions derived from Oryza rufipogon and O. nivara in improving grain morphology and quality of indica rice (Oryza sativa L.). Indian J. Genet, 78(2), 155-165.
Gaikwad, K. B., Rani, S., Kumar, M., Gupta, V., Babu, P. H., Bainsla, N. K., & Yadav, R. (2020). Enhancing the Nutritional Quality of Major Food Crops Through Conventional and Genomics-Assisted Breeding. Frontiers in Nutrition, 7.
Gaikwad, K. B., Singh, N., Kaur, P., Rani, S., Babu H, P., & Singh, K. (2020). Deployment of wild relatives for genetic improvement in rice (Oryza sativa). Plant Breeding.
Babu, P., Baranwal, D.K., Harikrishna, D.P., Bharti, H., Joshi, P., Thiyagarajan, B., Gaikwad, K.B., Bhardwaj, S.C., Singh, G.P. and Singh, A., (2020). Application of genomics tools in wheat breeding to attain durable rust resistance. Frontiers in Plant Science, 11.
Kanchan B. M. Singh, Pawan Jayaswal, Uma Rao, Jayanthi Madhavan, P. K. Mandal (2022) Comparative transcriptome profiling of Polianthes tuberosa during a compatible interaction with root-knot nematode Meloidogyne incognita https://doi.org/10.1007/s11033-022-07294-4
Jayanthi, M., Singh, K.B.M., Anand, A. et al.(2021) Estimation of endogenous indole-3-acetic acid in leaf explants and a protocol for direct regeneration in Lilium cv. Pavia. In vitro Cell.Dev.Biol.-Plant (2021). 57, 10511056
Jayanthi Madhavan, Kanchan B. M. Singh, RaghunathSadhukhan, Shivani Chandra, Uma Rao, P. K. Mandal (2020) Production of nematode free plantlets in Polianthes tuberosa using in vitro culture techniques, Horticulture, Environment and Biotechnology, 61, 929937.
Jayanthi M, Nagavara Prasad Gantasala, Pradeep Kumar Papolu, Prakash Banakar, ChanchalKumari and Uma Rao(2015) Identification and Evaluation of Internal Control Genes for Gene Expression Studies by Real-Time Quantitative PCR normalization in different tissues of Tuberose (Polianthestuberosa).Scientia Horticulturae,194: 63-70
Jayanthi, M,Susanthi B, Murali Mohan N. And Mandal, P. K. (2015) In vitro somatic embryogenesis and plantlet regeneration from immature male inflorescence of adult dura and tenera palms of Elaeis guineensis (Jacq). Springer Plus, 4:256 doi:10.1186/s40064-015-1025-4
Jayanthi M and P. K. Mandal (2001) In vitro propagation of Tylophora indica by somatic embryogenesis and RAPD analysis of regenerants, In vitro Cellular and Development Biology 37 (5) 576-580
Jayanthi, M., and Anjali Anand (2018) Exposure to magnetic fields reveals a positive effect on in vitro propagation of Stevia rebaudiana (Bertoni),Sugartech,, (2019) 21, 4, 691-695
Jayanthi. M,Murali Mohan N., Mandal P.K.(2011) Direct embryogenesis and plantlet regeneration in oil palm , Journal Of Plant Biochemistry And Biotechnology, 20(2): 249-251.
Jayanthi M and P. K. Mandal (2001) Low genetic polymorphism in natural populations of Crotalaria longipes Wight &Arn. an endangered legume, Biologia Plantarum 44 (3) 455-457
Jayanthi. M.,Jaiswal, P., Singh, K.B.M, & Rao, U. (2018). Identification of putative flowering genes and transcription factors from flower de novo transcriptome dataset of tuberose (Polianthes tuberosa L.). Data in brief. 20, 2027-2035. doi:10.1016/j.dib.2018.09.051
Molecular and morpho-agronomical characterization of root architecture at seedling and reproductive stages for drought tolerance in wheat RSS Tomar, S Tiwari, BKN Vinod, S Chand, R Deshmukh, N Mallick, ... PloS one 11 (6)
Marker‐assisted backcross breeding to combine multiple rust resistance in wheat N Mallick, JB Sharma, RS Tomar, M Sivasamy, KV Prabhu Plant breeding 134 (2), 172-177
Marker-assisted pyramiding of Thinopyrum-derived leaf rust resistance genes Lr19 and Lr24 in bread wheat variety HD2733 M Singh, N Mallick, S Chand, P Kumari, JB Sharma, M Sivasamy, ... Journal of genetics 96 (6), 951-957
Genetics and mapping of a new leaf rust resistance gene in Triticum aestivum L. Triticum timopheevii Zhuk. derivative Selection G12 AK Singh, JB Sharma, PK Singh, A Singh, N Mallick Journal of genetics 96 (2), 291-297
Molecular characterization of Triticum militinae derived introgression lines carrying leaf rust resistance V Nataraj, JB Sharma, J Chanwala, N Mallick, SK Jha Genetic resources and crop evolution 65 (3), 787-796
Cytogenetic analysis and mapping of leaf rust resistance in Aegilops speltoides Tausch derived bread wheat line Selection2427 carrying putative gametocidal M Niranjana, Vinod, JB Sharma, N Mallick, SMS Tomar, SK Jha Genome 60 (12), 1076-1085
S. K. Jha, N. K. Singh, R. Arun Kumar, P. K. Agrawal, J. C. Bhatt, S. K. Guleria, A. A. Lone, R. S. Sudan, K. P. Singh and V. Mahajan. (2013) Additive main effects and multiplicative interaction analysis for grain yield of short duration maize hybrids in North-Western Himalayas. Indian J. Genet., 73(1): 29-35
S. K. Jha, N. K. Singh, P. K. Agrawal (2016) Complementation of sweet corn mutants: a method for grouping sweet corn genotypes. Journal of Genetics 95(1):183-187
S. Lekshmy#, S. K. Jha# (2017) Selection of reference genes suitable for qRT-PCR expression profiling of biotic stress, nutrient deficiency and plant hormone responsive genes in bread wheat. Indian Journal of Plant Physiology 22(1):101-106#Contributed equally to this work
S. K. Jha, N. K. Singh and P. K. Agrawal (2019) Modified backcross breeding method for rapid conversion of field corn line to shrunken2 (sh2) gene-based sweet corn line. Indian J. Genet., 79(1): 34-39
K. Rani#, B.R. Raghu#, S.K. Jha#, P. Agarwal, N. Mallick, M. Niranjana, J.B. Sharma, A.K. Singh, N.K. Sharma, S. Rajkumar, S.M.S. Tomar and Vinod (2020) A novel leaf rust resistance gene introgressed from Aegilops markgrafii maps on chromosome arm 2AS of wheat. Theoretical and Applied Genetics: DOI- 10.1007/s00122-020-03625-w #contributed equally to this work
Aakriti Verma#, M. Niranjana#, S. K. Jha#, Niharika Mallick, Priyanka Agarwal and Vinod (2020). QTL detection and putative candidate gene prediction for leaf rolling under moisture stress condition in wheat Scientific Reports, 10:18696 doi.org/10.1038/s41598-020-75703-4 #Joint first author
Vishal Dinkar, S. K. Jha, Niharika Mallick, M. Niranjana, Priyanka Agarwal, J.B. Sharma and Vinod (2020). Molecular mapping of a new recessive wheat leaf rust resistance gene originating from Triticum spelta. Scientific Reports, DOI: 10.1038/s41598-020-78679-3
Hurali, D.T., Bhurta, R., Tyagi, S., Sathee, L., Adavi, S.B., Singh, D., Mallick, N., Vinod & Jha S.K.* (2022) Analysis of NIA and GSNOR family genes and nitric oxide homeostasis in response to wheat-leaf rust interaction. Scientific Reports, 12, 803 . https://doi.org/10.1038/s41598-021-04696-5
Bhurta R, Hurali DT, Tyagi S, Sathee L, Adavi B S, Singh D, Mallick N, Chinnusamy V, Vinod and Jha SK* (2022) Genome-Wide Identification and Expression Analysis of the Thioredoxin (Trx) Gene Family Reveals Its Role in Leaf Rust Resistance in Wheat (Triticum aestivum L.). Front. Genet. 13:836030. doi: 10.3389/fgene.2022.836030
Raghunandan, K., Jatin Tanwar, Shivanagouda N. Patil, Ajay Kumar Chandra, Sandhya Tyagi, Priyanka Agarwal, Niharika Mallick, Niranjana Murukan, Jyoti Kumari, Tanmaya Kumar Sahu, Sherry R. Jacob, Atul Kumar, Suresh Yadav, Sneha Nyamgoud, Vinod, Amit Kumar Singh, and Shailendra Kumar Jha* (2022) Identification of Novel Broad-Spectrum Leaf Rust Resistance Sources from Khapli Wheat Landraces. Plants 11, no. 15: 1965. https://doi.org/10.3390/ plants11151965
Saini, N., Koramutla, M.K., Singh, N., Singh, S., Singh, R., Yadav, S., Bhattacharya, R., Vasudev, S. and Yadava, D.K., 2019. Promoter polymorphism in FAE1. 1 and FAE1. 2 genes associated with erucic acid content in Brassica juncea. Molecular Breeding, 39(5), p.75.
Saini, N., Singh, N., Kumar, A., Vihan, N., Yadav, S. and Vasudev, S., 2016. Development and validation of functional CAPS markers for the FAE genes in Brassica juncea and their use in marker-assisted selection. Breeding science, p.16132.
Khar, A. and Saini, N., 2016. Limitations of PCR‐based molecular markers to identify male‐sterile and maintainer plants from Indian onion (Allium cepa L.) populations. Plant Breeding, 135(4), pp.519-524.
Afzal, A.J., Srour, A., Saini, N., Hemmati, N., El Shemy, H.A. and Lightfoot, D.A., 2012. Recombination suppression at the dominant Rhg1/Rfs2 locus underlying soybean resistance to the cyst nematode. Theoretical and applied genetics, 124(6), pp.1027-1039.
Afzal, A.J., Srour, A., Natarajan, A., Saini, N., Iqbal, M.J., Geisler, M., El Shemy, H.A. and Lightfoot, D.A., 2012. Resistance to soybean cyst nematode: Rhg1. Plant Genetics, Genomics, and Biotechnology, 1(2), pp.39-45.
Afzal, A.J., Natarajan, A., Saini, N., Iqbal, M.J., Geisler, M., El Shemy, H.A., Mungur, R., Willmitzer, L. and Lightfoot, D.A., 2009. The nematode resistance allele at the rhg1 locus alters the proteome and primary metabolism of soybean roots. Plant physiology, 151(3), pp.1264-1280.
Saini, Navinder, Jeffry Shultz, and David A. Lightfoot. "Re-annotation of the physical map of Glycine max for polyploid-like regions by BAC end sequence driven whole genome shotgun read assembly." BMC genomics 9.1 (2008): 323.
Jain, N., Jain, S., Saini, N. and Jain, R.K., 2006. SSR analysis of chromosome 8 regions associated with aroma and cooked kernel elongation in Basmati rice. Euphytica, 152(2), pp.259-273.
Saini, N., Jain, N., Jain, S. and Jain, R.K., 2004. Assessment of genetic diversity within and among Basmati and non-Basmati rice varieties using AFLP, ISSR and SSR markers. Euphytica, 140(3), pp.133-146.
Kaushik, A., Saini, N., Jain, S., Rana, P., Singh, R.K. and Jain, R.K., 2003. Genetic analysis of a CSR10 (indica) Taraori Basmati F 3 population segregating for salt tolerance using ISSR markers. Euphytica, 134(2), p.231.
Kumar, Neeraj, K. R. Soren, C. Bharadwaj, Sneha Priya PR, Abhishek K. Shrivastava, Madan Pal, Manish Roorkiwal et al. "Genome-wide transcriptome analysis and physiological variation modulates gene regulatory networks acclimating salinity tolerance in chickpea." Environmental and Experimental Botany 187 (2021): 104478.
Kumar, Neeraj, Chellapilla Bharadwaj, Sarika Sahu, Aalok Shiv, Abhishek Kumar Shrivastava, Sneha Priya Pappula Reddy, Khela Ram Soren et al. "Genome-wide identification and functional prediction of salt-stress related long non-coding RNAs (lncRNAs) in chickpea (Cicer arietinum L.)." Physiology and Molecular Biology of Plants 27, no. 11 (2021): 2605-2619.
Kumar, Neeraj, Hirdayesh Anuragi, Maneet Rana, Parichita Priyadarshini, Rajesh Singhal, Subhash Chand, Vinod Kumar Sood, Sultan Singh, and Shahid Ahmed. "Elucidating morpho‐anatomical, physio‐biochemical and molecular mechanism imparting salinity tolerance in oats (Avena sativa)." Plant Breeding 140, no. 5 (2021): 835-850.
Kumar, Neeraj, C. Bharadwaj, K. R. Soren, M. C. Meena, PR Sneha Priya, Nilesh Joshi, Anjali Soni et al. "Response of shoot ionic (Na+/K+) distribution on yield and agro-physiological traits in chickpea (Cicer arietinum L.) recombinant inbred lines population under salinity." INDIAN JOURNAL OF GENETICS AND PLANT BREEDING 81, no. 04 (2021): 92-95.
Kumar, Neeraj, Chellapilla Bharadwaj, Anjali Soni, S. U. P. R. I. Y. A. Sachdeva, M. C. Yadav, M. A. D. A. N. Pal, K. R. Soren et al. "Physio-morphological and molecular analysis for salt tolerance in chickpea (Cicer arietinum)." Indian Journal of Agricultural Sciences 90, no. 4 (2020): 132-136.
Soren, Khela Ram*, Praveen Madugula*, Neeraj Kumar*, Rutwik Barmukh, Meenu Singh Sengar, Chellapilla Bharadwaj, Parbodh Chander Sharma et al. "Genetic dissection and identification of candidate genes for salinity tolerance using Axiom® CicerSNP array in chickpea." International journal of molecular sciences 21, no. 14 (2020): 5058. (*Joint First Authors)
Naresh K. Bainsla, Rajbir Yadav, G.P. Singh and R.K. Sharma 2020. Additive Genetic Behavior of Stem Solidness in Wheat (Triticum aestivum L.), Scientific Reports DOI: 10.1038/s41598-020-64470-x, NAAS rating 10.01
Naresh K. Bainsla, Rahul M. Phuke, Xinyao He, Vikas Gupta, Santosh K. Bishnoi, Rajiv K. Sharma, Najibeh Ataei, Susanne Dreisigacker, Philomin Juliana and Pawan K. Singh 2020. Genome-wide association study for spot blotch resistance in Afghan wheat germplasm, Plant Pathology. DOI: 10.1111/ppa.13191 NAAS rating : 8.49
Naresh K. Bainsla, Vikram Singh, Arvind Kumar, Manjeet Kumar, Ambrish K Sharma, Akshay Sakhare and R. K. Sharma,2020.Root architectural traits and yield stability in popular wheat (Triticum aestivum) varieties of India.Indian Journal of Agricultural Sciences 90(7):1291-1296
Naresh Kumar Bainsla, Rajbir Yadav, Ram Kumar Sharma, Ambrish Sharma, Kiran B Gaikwad, Amit Kumar, Vikram Singh, Pritesh Vyas, Ambika Sharma 2018. Mechanistic understanding of lodging in spring wheat (Triticum aestivum): An Indian perspective, Indian Journal of Agricultural Sciences 88 (10): 1483-95.
Mukri G, Nadaf HL, Bhat RS, Gowda MVC, Upadhyaya HD. and Sujay V.,2012, Phenotypic and molecular dissection of ICRISAT mini core collection of peanut(Arachis hypogaea L.) for high oleic acid. Plant Breeding, 131, 418-422.
Upadhyaya HD, Mukri G, Nadaf HL, and Singh S.,2012, Variability and Stability Analysis for Nutritional Traits in the Mini Core Collection of Peanut. Crop science, 52(1): 168-178
Pandey MK, Upadhyaya HD, Rathore A, Vadez V, Sheshshayee MS, Sriswathi M, Govil M, Kumar A, Gowda MVC, Sharma S, Hamidou F,V. Kumar A, Khera P, Bhat RS, Khan AW, Singh S, Li H, Monyo E, Nadaf HL, Mukri G, Jackson SA, Guo B, Liang X, Varshney RK.., 2014, Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the Reference Set Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLOS ONE, 9 (8) 1-14
Khedikar Y, Pandey M.K., Sujay V, Singh Sube, Nayak SN, Klein-Gebbinck HW, Sarvamangala C, Mukri G, Garg V., Upadhyaya H.D., Nadaf H. L., Gowda M. V. C., Varshney R.K.,. Bhat R.S., 2018, Identification of main effect and epistatic quantitative trait loci for morphological and yield-related traits in peanut (Arachis hypogaea L.) Mol Breed, 38 (1):7
Nepolean T, Kaul J, Mukri G and Mittal S (2018) Genomics-Enabled Next-Generation Breeding Approaches for Developing System-Specific Drought Tolerant Hybrids in Maize. Front. Plant Sci. 9:361.
Muraleedhar Aski, Mehra, R., Mishra, G.P., Singh, D., Yadav, P., Rai, N., Reddy, V.R.P., MB, A.K., Pandey, R., Singh, M.P., Gayacharan., Bansal, R., Tripathi, K., Udupa, S.M., Kumar, S., Sarker, A. and Dikshit H.K. (2022) Genotypic variation in root architectural traits under contrasting phosphorus levels in Mediterranean and Indian origin lentil genotypes. PeerJ 10:e12766
Muraleedhar Aski, Neha Rai, Reddy, Harsh Kumar Dikshit, Gyan Prakash Mishra, et al (2021) Assessment of root phenotypes in mungbean mini-core collection (MMC) from the World Vegetable enter (AVRDC) Taiwan. PLoS ONE 16(3): 1-21
VRP Reddy, M S Aski, GP Mishra, HK Dikshit, A Singh, R Pandey, et al (2020) Genetic variation for root architectural traits in response to phosphorus deficiency in mungbean at the seedling stage PLoS ONE 15 (6), e0221008
Muraleedhar Aski, Harsh Kumar Dikshit, Dharmendra Singh, Akanksha Singh and Prapti Prakash (2015) Inheritance of resistance to Mungbean Yellow Mosaic India Virus (MYMIV) in mungbean (Vigna radiata L. Wilczek) Indian Journal of Agricultural Research. 85 (9): 1144-1147
Muraleedhar S. Aski, J.S.V. Murthy, P.V. Rama Kumar and Srinivasa Rao. (2005) Mahalanobis’ D2 and Principal Component analysis of genetic diversity in tetraploid cotton (Gossypium hirsutum L)”. The Andhra agriculture journal 52(1&2) 99-106
Mishra, G.P., Aski, M.S., Bosamia, T., Chaurasia, S., Mishra, D.C., Bhati, J., Kumar, A., Javeria, S., Tripathi, K., Kohli, M., Kumar, R.R., Singh, A.K., Devi, J., Kumar, S. and Dikshit*, H.K. (2022) Insights into the Host-Pathogen Interaction Pathways through RNA-Seq Analysis of Lens culinaris Medik. in Response to Rhizoctonia bataticola Infection. Genes 2022, 13, 90. https://doi.org/ 10.3390/genes13010090
Ramtekey, V., Bansal, R., Aski, M.S., Kothari, D., Singh, A., Pandey, R., Tripathi, K., Mishra, G.P., Kumar, S. and Dikshit , H.K. (2021) Genetic Variation for Traits Related to Phosphorus Use Efficiency in Lens Species at the Seedling Stage. Plants 2021, 10, 2711. https://doi.org/ 10.3390 plants10122711
Gupta, S., Das, S., Dikshit, H.K., Mishra, G.P., Aski, M.S., Bansal, R., Tripathi, K., Bhowmik, A. and Kumar, S. (2021) Genotype by Environment Interaction Effect on Grain Iron and Zinc Concentration of Indian and Mediterranean Lentil Genotypes. Agronomy 11, 1761. https:// doi.org/10.3390/agronomy11091761
Reddy, V.R.P., Das, S., Dikshit, H.K., Mishra, G.P., Aski, M.S., Singh, A., Tripathi, K., Pandey, R., Bansal, R., Pal Singh, M. and Gore, P.G., 2021. Genetic Dissection of Phosphorous Uptake and Utilization Efficiency Traits Using GWAS in Mungbean. Agronomy, 11(7), p.1401.
Singh D, Chaudhary P, Taunk J, Singh CK, Singh D, Tomar RS, Aski M, Konjengbam NS, Raje RS, Singh S, Sengar RS. Fab Advances in Fabaceae for Abiotic Stress Resilience: From ‘Omics’ to Artificial Intelligence. International Journal of Molecular Sciences. 2021 Jan; 22(19):10535.
Mallikarjuna MG*, Sharma R, Veeraya P, Tyagi A, Rao AR, Lohithaswa HC and Chinnusamy V (2022). Evolutionary and functional characterisation of glutathione peroxidases showed splicing mediated stress responses in Maize. Plant Physiology and Biochemistry. 178: 40-54. DOI: 10.1016/j.plaphy.2022.02.024
Mallikarjuna MG*, Thirunavukkarasu N, Sharma R, Shiriga K, Hossain F, Bhat JS, Mithra AC, Marla SS, Manjaiah KM, Rao A, Gupta HS (2020). Comparative transcriptome analysis of iron and zinc deficiency in maize (Zea mays L.). Plants. 9:1812. DOI: 10.3390/plants9121812
Aravind J, Sharma R, Banduni P, Mittal S, Shiriga K, Mallikarjuna MG, Kumar A, Rao AR and Thirunavukkarasu N. (2017) Identification, characterization and functional validation of drought-responsive microRNAs in subtropical maize inbreds. Frontiers in Plant Science. 8: 941. doi: 10.3389/fpls.2017.00941
Gioi HA, Mallikarjuna MG, Mittal S, Banduni P, Jha SK, Dash PK, Arunkumar M B, Gadag RN, Rao AR and Thirunavukkarasu N. (2017). Variable level of dominance of candidate genes controlling drought functional traits in maize hybrids. Frontiers in Plant Science. 8: 940. doi: 10.3389/fpls.2017.00940
Jeevan B, Gogoi R, Sharma D, Manjunatha C, Rajashekar H, Ram D, Mishra KK, MG Mallikarjuna* (2020). Genetic analysis of maydis leaf blight resistance in subtropical maize (Zea mays L.) germplasm. Journal of Genetics 99 (89): 1-9. DOI:10.1007/s12041-020-01245-3.
Arora K, Panda KK, Mittal S, Mallikarjuna MG, Rao AR, Dash PK and Thirunavukkarasu N. (2017). RNAseq revealed the important gene pathways controlling adaptive mechanisms under waterlogged stress in maize. Scientific Reports, 8; 7(1):10950. doi:10.1038/s41598-017-10561-1
Kumari P, Gogoi R, Basavaraj YB, Srinivasa N, Kumar A, Shekhar M and Mallikarjuna MG* (2021). Screening methods, genetic variability and correlation studies for Aspergillus flavus resistance in sub-tropical maize (Zea mays L.). Maydica. 66(2):10.
Mallikarjuna MG, Nepolean T, Mittal S, Hossain F, Bhat JS, Manjaiah KM, Marla SS, Mithra ACR, Agrawal PK, Rao AR and Gupta HS. (2016). In-silico characterisation and comparative mapping of yellow stripe like (YSL) transporters in five grass crop species. Indian Journal of Agricultural Sciences (The), 86(5), 621-7.
Mallikarjuna MG, Nepolean T, Hossain F, Bhat JS, Jha SK, Rathore A, Agrawal PK, Pattanayak A, Reddy SS, Gularia SK, Singh AM, Manjaiah KM and Gupta HS. (2015). Stability Performance of Inductively Coupled Plasma Mass Spectrometry-Phenotyped Kernel Minerals Concentration and Grain Yield in Maize in Different Agro-Climatic Zones. PLoS One, 10(9), e0139067.
Mallikarjuna MG, Nepolean T, Hossain F, Manjaiah KM, Singh AM and Gupta HS. (2014). Genetic variability and correlation of kernel micronutrients among exotic quality protein maize inbreds and their utility in breeding programme. Indian Journal of Genetics and Plant Breeding (The), 74(2), 166-173.
Haritha Bollinedi, Jyoti DL, Gopala Krishnan S, Bhowmick PK, Prabhu KV, Singh NK and Singh AK (2019) Kinetics of β-carotene degradation under different storage conditions in transgenic Golden Rice lines. Food Chemistry 278: 773- 779
Genetic and genomic approaches to address rapid rancidity of rice bran H Bollinedi, AK Singh, N Singh, PK Bhowmick, V K. K - Critical Reviews in Food Science and Nutrition, 2020
Genome-wide association study reveal novel QTLs governing the localization of Fe and Zn in the rice grain H Bollinedi, AK Yadav, V KK, PK Bhowmick, RK Ellur - Frontiers in Genetics, 2020
Molecular and functional characterization of GR2-R1 event based backcross derived lines of Golden Rice in the genetic background of a mega rice variety swarna H Bollinedi, S Gopala Krishnan, KV Prabhu, NK Singh - PloS one, 2017
Babu NN, Gopala Krishnan S, Vinod KK, Krishnamurthy SL, Singh VK, Singh MP, Singh R, Ellur RK, Rai V, Bollinedi H, Bhowmick PK, Yadav A, Mariappan N, Singh NK, Prabhu K and Singh AK (2017) Marker aided incorporation of Saltol, a major QTL associated with seedling stage salt tolerance, into Oryza sativa Pusa Basmati 1121. Front. Plant Sci. 8: 41. doi: 10.3389/fpls.2017.00041.
Kumar A, Singh VJ, Krishnan SG, Vinod KK, Bhowmick PK, Nagarajan M, Ellur RK, Haritha B & Singh AK (2019) WA-CMS-based iso-cytoplasmic restorers derived from commercial rice hybrids reveal distinct population structure and genetic divergence towards restorer diversification. 3 Biotech 9: 299
Pullulanase activity: A novel indicator of inherent resistant starch in rice (Oryza sativa. L) V Krishnan, M Awana, MK Samota, SI Warwate - International journal of biological macromolecules, 2019
Saini, N., Yashpal, Koramutla, M.K., Singh, N., Singh, S., Singh, R., Yadav, S., Bhattacharya, R., Vasudev, S. and Yadava, D.K., 2019. Promoter polymorphism in FAE1. 1 and FAE1. 2 genes associated with erucic acid content in Brassica juncea. Molecular Breeding, 39(5), p.75
Zunjare R.U, Hossain F., Muthusamy V., Baveja A., Chauhan H.S., Bhat J.S., Saha S. and Gupta H.S. (2018). Development of biofortified maize hybrids through marker-assisted stacking of β-carotene hydroxylase, lycopene-ε-cyclase and opaque2 genes. Frontiers in Plant Science 9:178. (NAAS Rating: 10.11)
Zunjare R.U., Chhabra R., Hossain F., Muthusamy V. and Gupta H.S. (2018). Molecular characterization of 5�UTR of lycopene epsilon cyclase (lcyE) gene among exotic and indigenous maize inbreds for its utilization in maize biofortification. 3Biotech 8: 75. doi:10.1007/s13205-018-1100-y. (NAAS Rating: 7.50)
Zunjare R.U., Chhabra R., Hossain F., Muthusamy V., Baveja A. and Gupta H.S. (2017). Development and validation of multiplex-PCR assay for simultaneous detection of rare alleles of crtRB1 and lcyE governing higher accumulation of provitamin-A in maize kernel. Journal of Plant Biochemistry and Biotechnology 27: 208�214. (NAAS Rating: 7.04)
Zunjare R.U., Hossain F., Muthusamy V., Baveja A., Chauhan H.S., Thirunavukkarasu N., Saha S. and Gupta H.S. (2017). Influence of rare alleles of β-carotene hydroxylase (crtRB1) and lycopene epsilon cyclase (lcyE) genes on accumulation of provitamin A carotenoids in maize kernels. Plant Breeding 136: 872�880. (NAAS Rating: 7.25)
Zunjare R., Hossain F., Muthusamy V., Vishwakarma A.K, Pandey N., Kumar P., Sekhar J.C., Jha S.K., Thirunavukkarasu N. and Gupta H.S. (2015). Analyses of genetic diversity among exotic- and indigenous- maize inbreds differing for responses to stored grain weevil (Sitophilus oryzae L.) infestation. Maydica 60-M28: 1�7. (NAAS Rating: 6.58)
Zunjare R., Hossain F., Muthusamy V., Choudhary M., Kumar P., Sekhar J.C., Guleria S.K., Singh N.K., Thirunavukkarasu N. and Gupta H.S. (2015). Popping quality attributes of popcorn hybrids in relation to weevil (Sitophilus oryzae) infestation. Indian Journal of Genetics and Plant Breeding 75(4): 510�513. (NAAS Rating: 6.47)
Zunjare R., Hossain F., Nepolean T., Muthusamy V., Jha S.K., Kumar P. and Gupta H.S. (2014). Evaluation of specialty corn inbreds for responses to stored grain weevil (Sitophilus oryzae L.) infestation. Indian Journal of Genetics and Plant Breeding 74 (Suppl.): 564-567. (NAAS Rating: 6.47)
R.K. Ellur, A. Khanna, S. Gopala Krishnan, P.K. Bhowmick, K.K. Vinod, M. Nagarajan, K.K. Mondal, N.K. Singh, K. Singh, K.V. Prabhu and A.K. Singh. 2016. Marker-aided Incorporation of Xa38, a Novel Bacterial Blight Resistance Gene, in PB1121 and Comparison of its Resistance Spectrum with xa13 + Xa21. Scientific Reports. 6: 29188
R.K. Ellur, A. Khanna, A. Yadav, S. Pathania, H. Rajashekara, V.K. Singh, S. Gopala Krishnan, P.K. Bhowmick, M. Nagarajan, K.K. Vinod, G. Prakash, K.K. Mondal, N.K. Singh, K.V. Prabhu and A.K. Singh. 2016. Improvement of Basmati rice varieties for resistance to blast and bacterial blight diseases using marker assisted backcross breeding. Plant Sci. 242 : 330-341
M Niranjana, Vinod, JB Sharma, N Mallick, SMS Tomar, SK Jha. 2017. Cytogenetic analysis and mapping of leaf rust resistance in Aegilops speltoides Tausch derived bread wheat line Selection2427 carrying putative gametocidal gene(s). Genome 60 (12), 1076-1085
A Verma, M Niranjana, SK Jha, N Mallick, P Agarwal. 2020. QTL detection and putative candidate gene prediction for leaf rolling under moisture stress condition in wheat. Scientific reports 10 (1), 1-13
M Niranjana. 2017. Gametocidal genes of Aegilops: segregation distorters in wheat–Aegilops wide hybridization. Genome 60 (8), 639-647
M Niranjana, SK Jha, N Mallick, A Verma, B Singh, A Ahlawat, et al. 2018. Distribution of genes producing phenol colour reaction in grains of wheat and its related species, mode of inheritance and breeding for low polyphenol activity. Indian Journal of Genetics and Plant Breeding 78 (04), 433-442
La H, Ding B, Mishra GP, Zhou B, Yang H, et al. (2011) A 5-methylcytosine DNA glycosylase/ lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice. Proc Nat Acad Sci USA. 108(37):15498-15503. doi:10.1073/pnas.1112704108
Nawade B, Mishra GP*, Radhakrishnan T, Dodia SM, Ahmad S, et al. (2018). High oleic peanut breeding: Achievements, perspectives, and prospects. Trends Food Sci Technol. 78:107- 119. doi:10.1016/j.tifs.2018.05.022
Mishra GP*, Singh B, Seth T, Singh AK, Halder J, et al. (2017). Biotechnological advancements and begomovirus management in okra (Abelmoschus esculentus L.): Status and perspectives. Front. Plant Sci. 8 (360), doi:10.3389/fpls.2017.00360
Nawade B, Bosamia TC, Radhakrishnan T, Mishra GP* (2016) Insights into the Indian peanut genotypes for ahFAD2 gene polymorphism regulating its oleic and linoleic acid fluxes. Front Plant Sci. 7:1271. doi:10.3389/fpls.2016.01271.
Mishra GP, Aski M, Bosamia T, Chaurasia S, Mishra DC, et al. (2022) Insights into the host-pathogen interaction pathways through RNA-Seq analysis of Lens culinaris Medik. in response to Rhizoctonia bataticola infection. Genes 13:90. https://doi.org/10.3390/genes13010090
Mishra GP*, Dikshit HK, Ramesh SV, Tripathi K, et al. (2020). Yellow mosaic disease (YMD) of mungbean (Vigna radiata (L.) Wilczek): Current status and management opportunities. Front. Plant Sci. 11:918. doi:10.3389/fpls.2020.00918
Mishra GP*, Dikshit HK, Kumari J, Priti, et al. (2020) Identification and characterization of novel Penta‐Podded genotypes in the cultivated lentil (Lens culinaris Medik.). Crop Science, https://doi.org/10.1002/csc2.20156
Nawade B, Mishra GP*, Radhakrishnan T, Sangh C, et al. (2019) Development of high oleic peanut lines through marker-assisted introgression of mutant ahFAD2 alleles and its fatty-acid profiles under open-field and controlled conditions. 3Biotech 9:243. doi.10.1007/s13205-019-1774-9
Priti, Mishra GP*, Dikshit HK, Vinutha T, et al. (2021) Diversity in phytochemical composition, antioxidant capacities, and nutrient contents among mungbean and lentil microgreens when grown at plain-altitude region (Delhi) and high-altitude region (Leh-Ladakh), India. Front in Plant Sciences, 12:710812. doi: 10.3389/fpls.2021.710812
Dasgupta U, Mishra GP*, Dikshit HK, Mishra DC, et al. (2021) Comparative RNA-Seq analysis unfolds a complex regulatory network imparting yellow mosaic disease resistance in mungbean [Vigna radiata (L.) R. Wilczek]. Plos One 16(1):e0244593. doi:10.1371/journal.pone.0244593
Mahto RK, Ambika , Singh C, Chandana BS, Singh RK, Verma S, Gahlaut V, Manohar M, Yadav N and Kumar R* (2022) Chickpea Biofortification for Cytokinin Dehydrogenase via Genome Editing to Enhance Abiotic-Biotic Stress Tolerance and Food Security. Front. Genet. 13:900324. doi: 10.3389/fgene.2022.900324.
Upadhyaya, H. D.; Wang, L.; Prakash, C. S.; Liu Y.; Gao, L.; Meng,R.;Seetharam,K., Gowda,CLL.;Ganesamurthy,K.; Singh,S. K.;Kumar,R.;Liu,J., and Wang*, Y.H. (Online published and accepted on March 15, 2022). Genome Wide Association MappingIdentifies an SNF4 Ortholog that Impacts Biomass, Plant Height, SSC and Juice Yield in Sorghum and Sugarcane. Journal of Experimental Botany (Accepted JEXBOT/2021/306582).https://doi.org/10.1093/jxb/erac110.
Ambika; Hegde, Venkatraman; Nimmy, M. S.; Bharadwaj, C.; Tripathi, Shailesh; Singh, Rajesh Kumar; Kumar*, Rajendra (Published on line November 8, 2021).Unraveling genetics of semi?determinacy and identification of markers for indeterminate stem growth habit in chickpea (Cicer arietinum L.). Scientific Reports, 11(21837): 1-8, DOI: 10.1038/s41598-021-01464-3.
Lihua Wang*, Hari D. Upadhyaya, Jian Zheng, Yanlong Liu, Shailesh K. Singh, C.L.L. Gowda, Rajendra Kumar, Yongqun Zhu, Yi-Hong Wang, Jieqin Li* (Online published and accepted on September 6, 2021). Genome-wide Association Mapping Identifies Novel Panicle Morphology Loci and Candidate Genes in Sorghum. Frontiers in Plant Science, 12 (743838):1-9, DOI: 10.3389/fpls.2021.743838.
Singh, N., Kumar, R., Kumar, S., Singh, P. and Yadav, H.*(Published online Jan 23, 2021). Mapping QTLs for Alternaria blight in Linseed (Linum usitatissimum L.). 3 Biotech, 11(2):91-98,DOI: 10.1007/s13205-020-02638-y.
Anusha Ramani, Radha Kushwaha, Ritika Malaviya, Rajendra Kumar, Neelam Yadav* (Published online Feb 2, 2021). Molecular, Functional and Nutritional Properties of Chickpea (Cicer arietinum L.) Protein Isolates Prepared by Modified Solubilization Methods. Journal of Food Measurement and Characterization, 15(3), pp. 2352-2368, DOI: 10.1007/s11694-020-00778-6.
Basu, U., Bajaj, D., Sharma, A., Malik, N., Daware, A., Narnoliya, L., Thakro, V., Upadhyaya, H., Kumar, R., Tripathi, S., Bharadwaj, C., Tyagi, A. and Parida, S.* (2018). Genetic dissection of photosynthetic efficiency traits for enhancing seed yield in chickpea. Plant Cell and Environment, 42(1), pp.158-173, DOI:10.1111/pce.13319.
Srivastava, R., Upadhyaya, H.D., Kumar, R., Daware, A., Basu, U., Shimray, P.W., Tripathi, S., Bharadwaj, C., Tyagi, A.K. and Parida, S.K.* (2017). A Multiple QTL-Seq Strategy Delineates Potential Genomic Loci Governing Flowering Time in Chickpea. Frontiers in Plant Science, 8, pp. 1-13, DOI:10.3389/fpls.2017.01105.
Philanim Wungmarong Shimray, Deepak Bajaj, Rishi Srivastava, Anurag Daware, Hari D Upadhyaya, Rajendra Kumar, Chellapilla Bharadwaj, Akhilesh K Tyagi, Swarup K Parida (2017). Identifying Transcription Factor Genes Associated with Yield Traits in Chickpea. Plant Molecular Biology Reporter, 35(5): 562-574.
Srivastava, R., Bajaj, D., Sayal, Y.K., Meher, P.K., Upadhyaya, H.D., Kumar, R., Tripathi, S., Bharadwaj, C., Rao, A.R. and Parida, S.K.* (2016). Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea. Plant Science, 252 (11), pp.374387, DOI: 10.1016 / j.plantsci.2016.08.013.
Ambika Rajendran, Arunachalam Muthiah, John Joel, Ponnusamy Shanmugasundaram, Dhandapani Raju. 2014. Heterotic grouping and patterning of quality protein maize inbreds based on genetic and molecular marker studies. Turkish Journal of Biology. 38: 10-20.
A Rajendran, D Chaudhary, N Singh. 2018. Prospecting high oil in corn (Zea mays L.) germplasm for better quality breeding. Maydica 63 (1): 5
Ambika Rajendran, Nirupma Singh, Avinash Singode. 2018. Performance of grain maize (Zea mays) hybrids for dual utility in ideal maize agronomic conditions. Indian Journal of Agricultural Sciences. 88(11):
Ambika Rajendran, Lal SK. 2020. Assessing the need of pre-germination anaerobic stress tolerant varieties in Indian Soybean (Glycine max (L.) Merril). National Academy Science Letters.1-5
Dhandapani Raju, P. Avinash, H. P. Vijayakumar, Ambika Rajendran, G. Somasundaram, S. Natarajan and S. Rajendra Prasad. 2016. Comparative Protein Fraction Analysis for commercial Hybrid Seed Purity Testing in Cotton (Gossypium Hirsutum L.). Journal of Natural Fibres. 13(3): 268276
G Mukri, R Kumar, A Rajendran, B Kumar et al. 2018. Strategic selection of white maize inbred lines for tropical adaptation and their utilization in developing stable, medium to long duration maize hybrids. Maydica 63 (2): M16-3-8
P. Sanjeev, D.P. Chaudhary, P. Sreevastava, S. Saha, A. Rajendran, J.C. Shekhar and G.K. Chikkappa. 2014. Comparison of fatty acid profile of specialty maize to normal maize. Journal of American Oil Chemists Society 91: 1001-1005
R Dhandapani, VP Singh, A Arora, RC Bhattacharya, A Rajendran. 2017. Differential accumulation of β-carotene and tissue specific expression of phytoene synthase (MaPsy) gene in banana (Musa sp) cultivars. Journal of Food Science and Technology 54 (13), 4416-4426
Mahajan Vinay, Singh K. P., Rajendran R. Ambika, Kanya. 2012. Response of maize genotypes to changing climatic conditions in Himalayan region. Indian J. Genet Pl. Breed. 72(2): 183-185
Rajendran RA, Muthiah AR, Manickam A, Shanmugasundaram P, John JA (2011). Indices of drought tolerance in sorghum (Sorghum bicolor L. Moench) genotypes at early stages of plant growth. Res. J. Agric. Biol. Sci. 7: 42-46
Kapoor C, Shweta Singh, R.K. Avasthe, Chandramani Raj, Matber Singh and Hissay L. Lepcha (2022) Morphological description based on DUS characters and molecular characterization of ‘Sikkim Primitive’ Maize: an endangered unique genetic resource. Plant Genetic Resources: Characterization & Utilization, https://doi.org/10.1017/S1479262122000065.
Kapoor C, Chaudhary HK, Sharma P, Relan A, Manoj NV, Singh K and Sood VK. (2022). In-vivo haploid induction potential of Himalayan maize (Zea mays L.) and cogon grass (I.cylindrica) gene pools in different segregational cycles of intra and inter generic crosses ofwheat. Plant Genetic Resources: Characterization & Utilization, 1-8, doi10.1017/S1479262121000642
Sharma P, Chaudhary HK, Kapoor C, Manoj NV, Singh K and Sood VL. 2021. Molecular cytogenetic analysis of novel wheat-rye translocation lines and their characterization for drought tolerance and yellow rust resistance. Cereal Research Communications, https://doi.org/10.1007/s42976-021-00212-7.
Kapoor C, H. Kalita, R. Gopi, A. Pattanayak, Ravikant Avasthe, Matber Singh,Chandramani Raj and Shweta Singh (2020). Cross genera amplification of ginger EST SSRs in large cardamom using genomic DNA isolated from standardized simplified protocol for members of Zingiberaceae. Indian Journal of Biotechnology, 19, 323-330.
Kapoor C, H.K. Chaudhary, A. Relan, N.V. Manoj, K. Singh, P. Sharma (2020). Haploid induction efficiency of diverse Himalayan maize and cogon grass gene pools in hexaploid and tetraploid wheats and triticale following chromosome elimination mediated approach of doubled haploidy breeding. Cereal Research Communications, 48(4), 539-545.
Kumar A, Kapoor C, Rahman H, Karuppaiyan R, Rai S and Denzogpa R (2016). Multivariate analysis of ginger (Zingiber officinale Rosc.) germplasm of North Eastern India. Indian Journal of Genetics and Plant Breeding 76: 221-223.
Singhal T, Satyavathi CT, Singh SP, Kumar A, Sankar SM, Bhardwaj C, Mallik M, Bhat J, Anuradha N and Singh N (2021) Multi-Environment Quantitative Trait Loci Mapping for Grain Iron and Zinc Content Using Bi-parental Recombinant Inbred Line Mapping Population in Pearl Millet. Front. Plant Sci. 12:659789. doi: 10.3389/fpls.2021.659789
Sankar SM, Singh SP, Prakash G, Satyavathi CT, Soumya SL, Yadav Y, Sharma LD, Rao AR, Singh N and Srivastava RK (2021) Deciphering Genotype-By-Environment Interaction for Target Environmental Delineation and Identification of Stable Resistant Sources Against Foliar Blast Disease of Pearl Millet. Front. Plant Sci. 12:656158. doi: 10.3389 /fpls.2021. 656158
M Mallik, SP Singh, G Prakash, S Mukesh Sankar, Tripti Singhal, D Shyam Sunder, R Thribhuvan, Nirupma Singh, C Tara Satyavathi (2021).Inheritance and allelic relationship of foliar blast resistance gene (s) in pearl millet. Indian Journal of Agricultural Sciences ,91(2):107-111
R, Thribhuvan, Singh, S P, S, Mukesh Sankar, Mallik, M, Singhal, Tripti, Yadav, Prachi, Singh, Nirupma And Satyavathi, C Tara (2020). Genetics of fertility restoration of the A5 cytoplasm in pearl millet (Pennisetum glaucum).Indian Journal of Agricultural Sciences, 90 (11)
Singhal, T., Satyavathi, C. T., Singh, S. P., Sankar, S. M., Anuradha, N., Bharadwaj, C., Kumar, A., Mallik, M., & Singh, N. (2019). Identification of new stable and high iron rich fertility restorers in pearl millet. Indian Journal Of Genetics and Plant Breeding, 79(03), 552–562. https://doi.org/10.31742/IJGPB.79.3.4
Tripti Singhal, C Tara Satyavathi, Aruna Kumar, S Mukesh Sankar, SP Singh, C Bharadwaj, J Aravind, N Anuradha, MC Meena, Nirupma Singh (2018). Genotype× environment interaction and genetic association of grain iron and zinc content with other agronomic traits in RIL population of pearl millet. Crop and Pasture Science, 69 (11):1092-1102
Shekhar M, Singh N, Dutta R, Kumar S, Mahajan V (2017) Comparative study of qualitative and quantitative methods to determine toxicity level of Aspergillus flavus isolates in maize. PLoS ONE 12(12): e0189760. https://doi.org/10.1371/journal.pone.0189760
Meena Shekhar, Nirupma Singh, Sangit Kumar and Rashmi Kiran (2017).Role of mould occurrence for aflatoxin buildup and variability in Aspergillus flavus isolates of maize grains across India Quality Assurance and Safety of Crops & Foods 9(2). DOI https://doi.org/10.3920/QAS2015.0720
Nirupma Singh, Meena Shekhar, Ambika Rajendran and Ram Babu.2016.Evaluation of hybrids for yield and resistance to post flowering stalk rot in maize. Indian Phytopathology ,69(4s)734-736
Meena Shekhar, Rashmi Kiran and Nirupma Singh.2016.Genotypic variability in Maize for Total Phenolic, Total Flavonoids and sugar in response to stalk rot pathogens. Indian Phytopathology, 69(4s
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